Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4829 302 6e-77 seq5022 241 2e-58 >seq4829 Length=1098 Score = 302 bits (334), Expect = 6e-77 Identities = 575/837 (69%), Gaps = 20/837 (2%) Strand=Plus/Minus Query 49720 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 49779 || || || ||||| || || || ||||| ||||| | || | |||| | | || ||| Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014 Query 49780 TCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 49839 || | | |||||| || ||||| || | ||| ||||| || |||||| Sbjct 1013 GCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATA 954 Query 49840 CCTATAAGTTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATC 49898 || | | || || || || || |||| ||| | |||| |||||| || || || Sbjct 953 CCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTC 895 Query 49899 TGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAA 49958 || || || ||| || ||| ||| || | ||| |||||| ||| | ||| Sbjct 894 GGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAA 835 Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || |||||| || | ||| || ||||||| ||| || |||||||| ||||| | Sbjct 834 ACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAA 775 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || ||||| | || | |||||| | ||| || ||||| |||||||| ||||| ||||| Sbjct 774 ACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAA 715 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTGGCGCTGTCATGT- 50136 || ||||| || || ||||| || || | |||||| || | | || || | || | Sbjct 714 AATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTT-ATCTG 656 Query 50137 --ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 50194 ||||| ||| |||||| |||||||| | || | ||| || || ||||| || |||| Sbjct 655 CAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCAT 596 Query 50195 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 50254 | || | | | |||| || |||||| | |||||||| ||||| | | ||| Sbjct 595 TGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAG 536 Query 50255 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 50314 ||||||||||||||||||| || || || || || ||||||||| ||||||| | || Sbjct 535 TTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAA 476 Query 50315 TCTGCACTTCTGT--ACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 | || || || | | ||| || ||| ||||||||||||| ||||| || ||| || Sbjct 475 TTTGAACATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGC 418 Query 50373 TGCAAAAAACGC--CAATACATGTTTTATAAAATGT----TTTTCGTTGGGTGTTAGTTT 50426 ||||| ||||| || | || | | ||| | |||||||| | | || Sbjct 417 AGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCT---ATT 361 Query 50427 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTC 50486 |||||||||| | |||||| || | ||| | ||| ||| | ||||| || ||||| || Sbjct 360 GTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTC 301 Query 50487 TGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 |||||| || ||||| | ||| || || ||||| | |||||| || | |||||| || Sbjct 300 TGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 >seq5022 Length=2556 Score = 241 bits (266), Expect = 2e-58 Identities = 780/1197 (65%), Gaps = 33/1197 (3%) Strand=Plus/Minus Query 78711 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 78770 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 2184 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 2125 Query 78771 TTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 78830 || || || |||| || ||||||||||| ||||| ||| | |||| Sbjct 2124 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 2065 Query 78831 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 78890 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 2064 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 2005 Query 78891 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 78949 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 2004 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 1946 Query 78950 CTGGAAGGTT-TGTA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 79006 |||| || ||| |||||||| || ||| ||||| || || || || || Sbjct 1945 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 1886 Query 79007 CTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 79066 |||||||| | | | || |||| |||| | | || || || || | || | Sbjct 1885 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 1826 Query 79067 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCAT 79126 |||| || | || ||||| | || ||||||||| || || ||||| | |||| | Sbjct 1825 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 1766 Query 79127 TATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTC 79186 | | || | |||||||| ||||| || || ||||| ||||| || | || ||||| Sbjct 1765 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 1706 Query 79187 TAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGG-- 79244 | | ||| | | ||||||| || |||| || ||||| || | || || || Sbjct 1705 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTC----ATATAAGTTGGTT 1650 Query 79245 GACAAC--ATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 | | | | |||||||||| | ||||| | ||| | || |||||| | Sbjct 1649 GGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAA 1590 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 || ||||| ||||| ||| | | ||||||| ||| ||||| || || | | |||| Sbjct 1589 GTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAA 1530 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAAT-T 79421 |||||||| ||||| | |||| || || | ||||||| | ||||||||| |||| | Sbjct 1529 ATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCT 1471 Query 79422 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 79481 || | || || || ||||| || ||||| ||||||| | | || ||||| | |||| | Sbjct 1470 CAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCAT 1411 Query 79482 ATTAGA---AATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 79538 ||| || || ||| ||| || |||||| || || |||| || |||||||| | Sbjct 1410 ATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAA 1354 Query 79539 ATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAAT----CAAATCGT---- 79590 || | | || || | || | || || ||| | | || || Sbjct 1353 GTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTT 1294 Query 79591 -CCATCTATTACAA-ACATG--TTCAACGCGACAGATGCCAGATTACAAACGGCTACCTC 79646 |||| || ||| | ||| ||| || ||| || | ||||||||| ||| || Sbjct 1293 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 1234 Query 79647 ATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAA 79706 | || | ||||| | |||||| ||| | || | | || || || || Sbjct 1233 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 1174 Query 79707 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGT 79766 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 1173 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 1114 Query 79767 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTA 79826 |||| | |||| ||||| |||| | ||| | | | || || ||| | | || Sbjct 1113 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 1054 Query 79827 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATC 79883 ||| ||||||||| |||| ||||||||| || ||| || || || | ||||| Sbjct 1053 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATC 997 Score = 233 bits (258), Expect = 3e-56 Identities = 525/786 (67%), Gaps = 6/786 (1%) Strand=Plus/Minus Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 |||||| |||||||| || || | |||| || | | || |||| ||| || || || Sbjct 924 AATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACC 865 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 || || | || || || ||||||||| | || || | |||||||||||| |||||||| Sbjct 864 TTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGA 805 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 80219 ||||||||| || |||| ||||| ||| | | | ||||||| || || || Sbjct 804 TGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCC 745 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 || || || || |||| || || || || ||| ||| || ||||||||||| || || Sbjct 744 AATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTC 685 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 ||| ||| || |||| || || ||||| ||||||||| | | ||| || Sbjct 684 AATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACC 625 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 || ||| || | || |||||||| || || || | | | |||| | ||| || || Sbjct 624 CGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGT 565 Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 |||||| | || || ||||| |||||| || || || || | ||||| | || Sbjct 564 TTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATG 505 Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519 || || ||||| | ||||| ||||||| | || | ||| |||| || ||||| Sbjct 504 TTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTT 445 Query 80520 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 80579 |||||||||||||| || ||||||| || ||| ||| | | | | ||| Sbjct 444 GAAACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATT 385 Query 80580 CTTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATT 80639 | || ||| | || | ||| || ||||||| || |||| | |||| ||||| Sbjct 384 CGCATTTTTTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATT 325 Query 80640 TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 80699 |||||||| || ||| | ||| | | | |||||| ||| || |||||| Sbjct 324 TTTAGGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTG 265 Query 80700 CTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG--TTG- 80756 ||| |||| ||||| | || | ||| || || || | |||||||||||||| | | Sbjct 264 CTTTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGT 205 Query 80757 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 80816 ||| || || || || |||| || || | | | || ||||| || ||||| || || Sbjct 204 TGTCATATAA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACC 148 Query 80817 ATTATA 80822 || ||| Sbjct 147 ATCATA 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718216833252320