Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 291 8e-74
>seq4829
Length=1098
Score = 291 bits (322), Expect = 8e-74
Identities = 576/840 (69%), Gaps = 17/840 (2%)
Strand=Plus/Minus
Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATT--GACATAAACACTTTATCACAAC 13686
|| || || || |||||||| || ||||||||| | | | || || |||| |||||||
Sbjct 1076 AGGGAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATAC-CTTT-TCACAAC 1019
Query 13687 CTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13746
||| | | | |||| |||||| |||| |||||| | ||| ||| |||| ||||| ||
Sbjct 1018 CTAATGCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTAT 959
Query 13747 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 13806
||||||| | | || ||||| | | || || || ||||| ||| || |
Sbjct 958 TCATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGG 899
Query 13807 CCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 13866
| || | || || | | | ||| | | || | || || | |||| ||| |
Sbjct 898 CTTCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGA 839
Query 13867 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13926
||||| |||||||| ||| | || |||||||||| ||| || ||||| || || |
Sbjct 838 GCAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACG 779
Query 13927 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAA 13986
| || ||||||||||| |||| ||||| ||||| || || | |||||||| || || |
Sbjct 778 TCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGA 719
Query 13987 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14046
|||| || || ||||| |||||||| || | || | ||| ||||| |||| | ||| |
Sbjct 718 AGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTAT 659
Query 14047 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14106
| ||||||||| ||||||||| | |||| || ||| | ||||||||||| |
Sbjct 658 CTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTG 599
Query 14107 CATTAAATAAATATTC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165
|||| ||||| |||| ||| |||| | ||| | |||| |||||||| | ||| |
Sbjct 598 CATTGAATAAGAATTCACTTTCCTTTGGATCTTTGA-TGTAAGTATCAATCAATAAAGAA 540
Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225
|| |||| || || ||||||||||| || || || ||||| || ||| |||| ||
Sbjct 539 TAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCT 480
Query 14226 GACCATTGTACTTC-CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACT 14284
| ||| || || | | |||| | || | ||||||||||| ||||||||||||
Sbjct 479 GGAATTTGAACATCACTTGAGAAAT-TCTCAACTAAATTTTCATTGACTATACCATCAGA 421
Query 14285 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTGAGT-- 14339
||| ||||| || || | | || ||| ||| || || |||||| ||| | |
Sbjct 420 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAAT--CT-TTCATTTTCGTTCAATCT 364
Query 14340 -TTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14398
|| |||||||| ||||| || || ||||| | ||| || | ||||| ||| ||
Sbjct 363 ATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGC 304
Query 14399 GACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14458
| || || || |||||| ||| ||||| | ||| || ||||| | ||||| ||
Sbjct 303 TTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479693291679200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |