Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq4829 291 8e-74 >seq4829 Length=1098 Score = 291 bits (322), Expect = 8e-74 Identities = 576/840 (69%), Gaps = 17/840 (2%) Strand=Plus/Minus Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATT--GACATAAACACTTTATCACAAC 13686 || || || || |||||||| || ||||||||| | | | || || |||| ||||||| Sbjct 1076 AGGGAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATAC-CTTT-TCACAAC 1019 Query 13687 CTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13746 ||| | | | |||| |||||| |||| |||||| | ||| ||| |||| ||||| || Sbjct 1018 CTAATGCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTAT 959 Query 13747 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 13806 ||||||| | | || ||||| | | || || || ||||| ||| || | Sbjct 958 TCATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGG 899 Query 13807 CCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 13866 | || | || || | | | ||| | | || | || || | |||| ||| | Sbjct 898 CTTCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGA 839 Query 13867 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13926 ||||| |||||||| ||| | || |||||||||| ||| || ||||| || || | Sbjct 838 GCAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACG 779 Query 13927 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAA 13986 | || ||||||||||| |||| ||||| ||||| || || | |||||||| || || | Sbjct 778 TCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGA 719 Query 13987 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14046 |||| || || ||||| |||||||| || | || | ||| ||||| |||| | ||| | Sbjct 718 AGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTAT 659 Query 14047 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14106 | ||||||||| ||||||||| | |||| || ||| | ||||||||||| | Sbjct 658 CTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTG 599 Query 14107 CATTAAATAAATATTC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165 |||| ||||| |||| ||| |||| | ||| | |||| |||||||| | ||| | Sbjct 598 CATTGAATAAGAATTCACTTTCCTTTGGATCTTTGA-TGTAAGTATCAATCAATAAAGAA 540 Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225 || |||| || || ||||||||||| || || || ||||| || ||| |||| || Sbjct 539 TAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCT 480 Query 14226 GACCATTGTACTTC-CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACT 14284 | ||| || || | | |||| | || | ||||||||||| |||||||||||| Sbjct 479 GGAATTTGAACATCACTTGAGAAAT-TCTCAACTAAATTTTCATTGACTATACCATCAGA 421 Query 14285 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTGAGT-- 14339 ||| ||||| || || | | || ||| ||| || || |||||| ||| | | Sbjct 420 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAAT--CT-TTCATTTTCGTTCAATCT 364 Query 14340 -TTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14398 || |||||||| ||||| || || ||||| | ||| || | ||||| ||| || Sbjct 363 ATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGC 304 Query 14399 GACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14458 | || || || |||||| ||| ||||| | ||| || ||||| | ||||| || Sbjct 303 TTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479693291679200