Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 293 2e-74
>seq4829
Length=1098
Score = 293 bits (324), Expect = 2e-74
Identities = 577/841 (69%), Gaps = 17/841 (2%)
Strand=Plus/Minus
Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTT--GACATAAACACTTTATCACAAC 13474
|| || || || |||||||| |||||||||||||| | | || || |||| |||||||
Sbjct 1076 AGGGAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATAC-CTTT-TCACAAC 1019
Query 13475 CTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13534
||| | | | | || |||||| |||| |||||| | ||| ||| |||| ||||| ||
Sbjct 1018 CTAATGCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTAT 959
Query 13535 TCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAG 13594
||||||| | | || ||||| | | ||| || || ||||| ||| || |
Sbjct 958 TCATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGG 899
Query 13595 CCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 13654
| ||| | || || | | ||| | | || | || || | |||| ||| |
Sbjct 898 CTTCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGA 839
Query 13655 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13714
||||| |||||||| ||| | || |||||||||| ||| || ||||| || || |
Sbjct 838 GCAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACG 779
Query 13715 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAA 13774
| || ||||||||||| |||| ||||| ||||| || || | || ||||| || || |
Sbjct 778 TCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGA 719
Query 13775 AGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT 13834
|||| || || ||||| |||||||| || | | | ||| ||||| |||| | ||| |
Sbjct 718 AGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTAT 659
Query 13835 TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTG 13894
|| ||||||||| ||||||||| | |||| || ||| | |||||||| ||||
Sbjct 658 CTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTG 599
Query 13895 CATTGAATAAATGTTC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 13953
|||||||||| ||| ||| |||| | ||| ||||| |||||||| | ||| |
Sbjct 598 CATTGAATAAGAATTCACTTTCCTTTGGATCTT-TGATGTAAGTATCAATCAATAAAGAA 540
Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013
|| |||| || || |||||||| || || || || ||||| |||||| |||| |||
Sbjct 539 TAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCT 480
Query 14014 GACCATTGTACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACT 14072
| ||| || || | | |||| | || | || |||||||| || |||||||||
Sbjct 479 GGAATTTGAACATCACTTGAGAAAT-TCTCAACTAAATTTTCATTGACTATACCATCAGA 421
Query 14073 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTGAGT-- 14127
||| ||||| || || | | || ||| ||| || || |||||| ||| | |
Sbjct 420 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAAT--CT-TTCATTTTCGTTCAATCT 364
Query 14128 -TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14186
|| |||||||| ||||| || || ||||| | ||| || | ||||| ||| ||
Sbjct 363 ATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGC 304
Query 14187 GACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14246
| || || || |||||| ||| ||||| | ||| || ||||| | ||||| ||
Sbjct 303 TTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244
Query 14247 T 14247
|
Sbjct 243 T 243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478554174100320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |