Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4829 293 2e-74 >seq4829 Length=1098 Score = 293 bits (324), Expect = 2e-74 Identities = 577/841 (69%), Gaps = 17/841 (2%) Strand=Plus/Minus Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTT--GACATAAACACTTTATCACAAC 13474 || || || || |||||||| |||||||||||||| | | || || |||| ||||||| Sbjct 1076 AGGGAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATAC-CTTT-TCACAAC 1019 Query 13475 CTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13534 ||| | | | | || |||||| |||| |||||| | ||| ||| |||| ||||| || Sbjct 1018 CTAATGCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTAT 959 Query 13535 TCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAG 13594 ||||||| | | || ||||| | | ||| || || ||||| ||| || | Sbjct 958 TCATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGG 899 Query 13595 CCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 13654 | ||| | || || | | ||| | | || | || || | |||| ||| | Sbjct 898 CTTCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGA 839 Query 13655 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13714 ||||| |||||||| ||| | || |||||||||| ||| || ||||| || || | Sbjct 838 GCAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACG 779 Query 13715 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAA 13774 | || ||||||||||| |||| ||||| ||||| || || | || ||||| || || | Sbjct 778 TCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGA 719 Query 13775 AGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT 13834 |||| || || ||||| |||||||| || | | | ||| ||||| |||| | ||| | Sbjct 718 AGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTAT 659 Query 13835 TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTG 13894 || ||||||||| ||||||||| | |||| || ||| | |||||||| |||| Sbjct 658 CTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTG 599 Query 13895 CATTGAATAAATGTTC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 13953 |||||||||| ||| ||| |||| | ||| ||||| |||||||| | ||| | Sbjct 598 CATTGAATAAGAATTCACTTTCCTTTGGATCTT-TGATGTAAGTATCAATCAATAAAGAA 540 Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013 || |||| || || |||||||| || || || || ||||| |||||| |||| ||| Sbjct 539 TAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCT 480 Query 14014 GACCATTGTACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACT 14072 | ||| || || | | |||| | || | || |||||||| || ||||||||| Sbjct 479 GGAATTTGAACATCACTTGAGAAAT-TCTCAACTAAATTTTCATTGACTATACCATCAGA 421 Query 14073 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTGAGT-- 14127 ||| ||||| || || | | || ||| ||| || || |||||| ||| | | Sbjct 420 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAAT--CT-TTCATTTTCGTTCAATCT 364 Query 14128 -TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14186 || |||||||| ||||| || || ||||| | ||| || | ||||| ||| || Sbjct 363 ATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGC 304 Query 14187 GACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14246 | || || || |||||| ||| ||||| | ||| || ||||| | ||||| || Sbjct 303 TTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 Query 14247 T 14247 | Sbjct 243 T 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478554174100320