Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4829 264 2e-65 seq5022 219 6e-52 >seq4829 Length=1098 Score = 264 bits (292), Expect = 2e-65 Identities = 562/833 (67%), Gaps = 12/833 (1%) Strand=Plus/Minus Query 41825 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 41884 || || || ||||| || || || ||||| ||||| | || | |||| | | || ||| Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014 Query 41885 TCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATT 41944 || | | ||||||||| | || || | ||| ||||| || |||||| Sbjct 1013 GCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATA 954 Query 41945 CCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTC 42003 || | | || || || || || |||| ||| | |||| ||||||| || || || Sbjct 953 CCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTC 895 Query 42004 TGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAA 42063 || || || ||| || ||| ||| || | || |||||| ||| | ||| Sbjct 894 GGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAA 835 Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| || |||||| || | ||| |||||||||| ||| | |||||||| ||||| | Sbjct 834 ACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAA 775 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || ||||| | || | |||||| | ||| || || || |||||||| ||||| ||||| Sbjct 774 ACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAA 715 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT-- 42241 || ||||| || || ||||| || | | |||||| || | ||| | || | Sbjct 714 AATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGC 655 Query 42242 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||| ||| |||||| |||||||| | || | ||| || || ||||| || ||||| Sbjct 654 AATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATT 595 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 || | | | |||| || |||||| | || ||||| ||||| | | ||| | Sbjct 594 GAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGT 535 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 ||| |||||||||||||| || || || || || ||||||||| | ||||| | || Sbjct 534 TTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAAT 475 Query 42421 CTGTACTT--CTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCT 42478 || || | || | ||| || ||| |||||||||| || ||||| || ||| || Sbjct 474 TTGAACATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCA 417 Query 42479 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTATTC 42535 ||||| ||||| | || | || || || |||| | | ||| || ||| Sbjct 416 GCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTC 357 Query 42536 CAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595 ||||||| | |||||| || | ||| | ||| || | ||||| || |||||||||||| Sbjct 356 CAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCC 297 Query 42596 TTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 || || ||||| | ||| || || ||||| | ||||| || | |||||| || Sbjct 296 TTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 >seq5022 Length=2556 Score = 219 bits (242), Expect = 6e-52 Identities = 522/786 (66%), Gaps = 6/786 (1%) Strand=Plus/Minus Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 |||||| |||||||| || || | |||| || | | || || | ||| || || || Sbjct 924 AATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACC 865 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 || || | || || || ||||||||| | || || | |||||||||||| |||||||| Sbjct 864 TTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGA 805 Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACC 72302 || |||||| || |||| ||||| ||| | | | |||||| || || || Sbjct 804 TGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCC 745 Query 72303 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 72362 || || || || |||| || || || || ||| ||| || ||||||||||| || || Sbjct 744 AATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTC 685 Query 72363 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 72422 || ||| ||| |||| || || ||||| ||||||||| | | ||| || Sbjct 684 AATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACC 625 Query 72423 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 72482 || ||| || | || |||||||| || || || | | | |||| | ||| || || Sbjct 624 CGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGT 565 Query 72483 CTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATG 72542 |||||| | || || ||||| ||| || || || || || | ||||| | ||| Sbjct 564 TTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATG 505 Query 72543 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 72602 || || ||||| | ||||| ||||||| | || | || |||| || ||||| Sbjct 504 TTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTT 445 Query 72603 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATC 72662 |||||||||||||| || ||||||| || ||| ||| | || | | ||| Sbjct 444 GAAACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATT 385 Query 72663 CTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATT 72722 | || ||| | || || ||| || ||||||| || |||| | |||| ||||| Sbjct 384 CGCATTTTTTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATT 325 Query 72723 TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 72782 |||||||| || ||| | ||| | | | |||||| ||| || |||||| Sbjct 324 TTTAGGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTG 265 Query 72783 CTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG--TTG- 72839 ||| |||| ||||| | || | ||| || || | | |||||||||||||| | | Sbjct 264 CTTTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGT 205 Query 72840 TGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 72899 ||| || || || || |||| || || | | | || ||||| || ||||| || || Sbjct 204 TGTCATATAA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACC 148 Query 72900 ATTATA 72905 || ||| Sbjct 147 ATCATA 142 Score = 192 bits (212), Expect = 8e-44 Identities = 736/1147 (64%), Gaps = 37/1147 (3%) Strand=Plus/Minus Query 70837 AGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGT 70896 || || ||||| ||||| || || || |||| || || |||||||| ||||| | Sbjct 2141 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 2082 Query 70897 TTGGA-ATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGC 70955 || || | | |||| | || || ||||| || || ||||| | | | || Sbjct 2081 TTACCCATTGTT-GGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGC 2023 Query 70956 TCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 71015 || || || |||||||| | || || |||||||| | || ||||| | ||| ||||| Sbjct 2022 ACCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATA 1963 Query 71016 -AACTCGCTTAATATCTTCTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCAA 71071 || || ||| || |||| |||| || | || |||||||| || ||| ||||| | Sbjct 1962 TAAGTC-CTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGA 1904 Query 71072 TAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGAT 71131 | || ||||| || |||||||| | | | || |||| |||| | | || Sbjct 1903 TGATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATAT 1844 Query 71132 GAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTAT 71191 ||| || || | || ||||| || | || ||||| | || ||||||||| || | Sbjct 1843 AAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGT 1784 Query 71192 ACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTG 71251 | ||||| | | || || | || | |||||||| ||||| ||||||||||| |||| Sbjct 1783 AAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTG 1724 Query 71252 CCAC---CAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCC 71308 | || |||| || |||||| | ||||| | |||||| || |||| || |||| Sbjct 1723 CAACAAGCAAT-GA--ATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 1667 Query 71309 AATTCCAAAGATCCGATGG--TACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACT 71366 | | | | | | ||| | || | || | Sbjct 1666 AGTCATATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGA--CCTTGGGA 1609 Query 71367 AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGC 71426 || |||||| || | || || |||||||| || | | || |||| ||| || Sbjct 1608 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGC 1549 Query 71427 CTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGG 71486 ||| || || ||| |||||||||||| ||||| | |||| || || | |||||| || Sbjct 1548 CTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGG 1489 Query 71487 GCTATCAAATGGATAAT-TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATAC 71545 ||||||||| |||| | || | || || || ||||| || ||||| || |||| | Sbjct 1488 CGAATCAAATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAG 1430 Query 71546 CGATAGGTCTGTGTCTCTTATTAGA---AATTTCAGCTTCTGGAATAGGATAATAATTAA 71602 | || ||||||| |||| |||| || || ||| ||| || |||||| || || Sbjct 1429 CAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTC 1373 Query 71603 TATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAA 71662 |||| || |||||||| | ||| | | || || | || | || || || Sbjct 1372 TATCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAA 1313 Query 71663 AATCAAATC---------TCCCATCTATT---ACAAACACGTTCAAGGCAACAGATGCCA 71710 | | | | | | |||| || ||||| | ||| |||||| || | Sbjct 1312 AGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTA 1253 Query 71711 GATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTAC 71770 ||||||||| ||| || | || | ||||| | ||||||| ||| | ||| Sbjct 1252 AATTACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGG 1193 Query 71771 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 71830 | | ||||| || ||||||||||||||| || |||||||| ||||||||||| | Sbjct 1192 AAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATA 1133 Query 71831 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 71890 || || || |||||||||||| | |||| ||||| |||| | ||| | | | | Sbjct 1132 ACATGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTG 1073 Query 71891 CCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACT 71950 | || ||| | || || ||| ||||||||| |||| ||||||||| || ||| | Sbjct 1072 CTTTAATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATT 1013 Query 71951 CGTCTCC 71957 | || || Sbjct 1012 CATCACC 1006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671090643078880