Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4829 282 4e-71 >seq4829 Length=1098 Score = 282 bits (312), Expect = 4e-71 Identities = 574/841 (68%), Gaps = 21/841 (2%) Strand=Plus/Minus Query 12911 GAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTAT---TTTTTACACCCT 12967 ||||| || |||||||| ||||| |||||| | ||| | |||| |||| ||| ||| Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGT--AACG-TCGTATACCTTTTCACAACCT 1017 Query 12968 AATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTC 13027 ||| | | | | ||| || ||||||||||| | ||||| ||| ||||| ||| Sbjct 1016 AATGCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTC 957 Query 13028 ATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCT 13087 || || | || || ||||| | || || || || | | ||||| |||||||| ||| Sbjct 956 ATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGGCT 897 Query 13088 TCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATC 13147 ||| ||| || | ||| | | || || ||| | || | ||| ||| | | Sbjct 896 TCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGC 837 Query 13148 ATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTT 13207 | ||| |||||||| || || ||||||||||||| || |||||||| || || || Sbjct 836 AAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTC 777 Query 13208 AGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaa 13267 | ||| ||||| | |||| ||||| | ||| || || | ||||| ||||| || || Sbjct 776 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAG 717 Query 13268 aaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC 13327 || || |||||||| || ||||| || | |||||| || || || || |||| || Sbjct 716 AAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTA-TC 658 Query 13328 T-CTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGC 13386 | | ||||| ||| ||||| | || |||| || | || || |||| ||||| Sbjct 657 TGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGC 598 Query 13387 GTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATA 13446 || ||||| | | ||||||| ||| || |||||||| |||||||| ||| Sbjct 597 ATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATA 538 Query 13447 CATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGA 13506 |||| |||||||| ||||||||| |||||||| ||||| |||||| ||||||||| Sbjct 537 AGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGG 478 Query 13507 TACCTGAACTTC---GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACT 13563 | ||||| || ||| |||| | || |||| ||||| || ||||| || ||| Sbjct 477 AATTTGAACATCACTTGAG--AAAT-TCTCAACTAAATTTTCATTGACTATACCATCAGA 421 Query 13564 AGCAGCaaaaaaaGCAAGTATGTGCTT--AATAAAttttttttCGTTTTCTGACAA---C 13618 ||||||||| || || || | ||| ||| || | |||| ||||| ||| Sbjct 420 AGCAGCAAAGAACGCTAGAA--CTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTA 363 Query 13619 TTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCA 13678 || |||||| | |||||||| || | ||| | ||||| | ||||| ||||| || Sbjct 362 TTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCT 303 Query 13679 ACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAACACAACGTATCTT 13738 | |||||||| ||||| ||| || || | ||| || ||||| | ||| | ||| Sbjct 302 TCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCTT 243 Query 13739 C 13739 | Sbjct 242 C 242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430951997962776