Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 282 4e-71
>seq4829
Length=1098
Score = 282 bits (312), Expect = 4e-71
Identities = 574/841 (68%), Gaps = 21/841 (2%)
Strand=Plus/Minus
Query 12911 GAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTAT---TTTTTACACCCT 12967
||||| || |||||||| ||||| |||||| | ||| | |||| |||| ||| |||
Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGT--AACG-TCGTATACCTTTTCACAACCT 1017
Query 12968 AATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTC 13027
||| | | | | ||| || ||||||||||| | ||||| ||| ||||| |||
Sbjct 1016 AATGCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTC 957
Query 13028 ATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCT 13087
|| || | || || ||||| | || || || || | | ||||| |||||||| |||
Sbjct 956 ATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGGCT 897
Query 13088 TCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATC 13147
||| ||| || | ||| | | || || ||| | || | ||| ||| | |
Sbjct 896 TCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGC 837
Query 13148 ATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTT 13207
| ||| |||||||| || || ||||||||||||| || |||||||| || || ||
Sbjct 836 AAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTC 777
Query 13208 AGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaa 13267
| ||| ||||| | |||| ||||| | ||| || || | ||||| ||||| || ||
Sbjct 776 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAG 717
Query 13268 aaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC 13327
|| || |||||||| || ||||| || | |||||| || || || || |||| ||
Sbjct 716 AAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTA-TC 658
Query 13328 T-CTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGC 13386
| | ||||| ||| ||||| | || |||| || | || || |||| |||||
Sbjct 657 TGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGC 598
Query 13387 GTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATA 13446
|| ||||| | | ||||||| ||| || |||||||| |||||||| |||
Sbjct 597 ATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATA 538
Query 13447 CATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGA 13506
|||| |||||||| ||||||||| |||||||| ||||| |||||| |||||||||
Sbjct 537 AGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGG 478
Query 13507 TACCTGAACTTC---GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACT 13563
| ||||| || ||| |||| | || |||| ||||| || ||||| || |||
Sbjct 477 AATTTGAACATCACTTGAG--AAAT-TCTCAACTAAATTTTCATTGACTATACCATCAGA 421
Query 13564 AGCAGCaaaaaaaGCAAGTATGTGCTT--AATAAAttttttttCGTTTTCTGACAA---C 13618
||||||||| || || || | ||| ||| || | |||| ||||| |||
Sbjct 420 AGCAGCAAAGAACGCTAGAA--CTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTA 363
Query 13619 TTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCA 13678
|| |||||| | |||||||| || | ||| | ||||| | ||||| ||||| ||
Sbjct 362 TTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCT 303
Query 13679 ACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAACACAACGTATCTT 13738
| |||||||| ||||| ||| || || | ||| || ||||| | ||| | |||
Sbjct 302 TCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCTT 243
Query 13739 C 13739
|
Sbjct 242 C 242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430951997962776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |