Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq418 118 2e-22 seq3382 107 3e-19 >seq418 Length=309 Score = 118 bits (130), Expect = 2e-22 Identities = 174/245 (71%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 ||||| || |||||||||||||||| || ||||||||||| || | | | ||| | Sbjct 62 AGATC-CTCAGAGATAACATCCAAGGTATTACCAAGCCAGCAATTAGAAGATTAGCTAGA 120 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| |||||| | |||| | ||| | || ||||| || | | ||| | ||| Sbjct 121 AGAGGTGGTGTCAAGAGAATCTCGGCTTTGATTTACGAAGAAGTTAGGGCAGTTCTTAAG 180 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 | ||||| | | ||| || ||||| || ||||| || ||||| || | ||| Sbjct 181 ACTTTCCTTGAAAACGTCATTAGAGATGCAGTCACTTATACTGAACACGCAAAGAGAAAG 240 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || ||||||||| | ||| |||||||||| ||||| | ||||| | | |||||||| Sbjct 241 ACCGTCACCTCCTTAGATGTCGTCTATGCTTTGAAGAGACAAGGTAGAACCCTTTATGGT 300 Query 16688 TTTGG 16692 ||||| Sbjct 301 TTTGG 305 >seq3382 Length=312 Score = 107 bits (118), Expect = 3e-19 Identities = 175/251 (70%), Gaps = 1/251 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 ||||| ||| |||||||||||||||| || ||||||||||| ||| | | | ||| | Sbjct 62 AGATC-CTTAGAGATAACATCCAAGGTATTACCAAGCCAGCAATCAGAAGATTAGCTAGA 120 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || ||| | | || | ||| | || ||||| | | | ||| | ||| Sbjct 121 AGAGGTGGTGTGAAGAGAATTTCAGCTTTGATTTACGAAGAAGTCAGAGCCGTTCTTAAG 180 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 | |||||| | | |||||| || || || |||||||| ||||| || | ||| Sbjct 181 ACCTTCCTTGAAAACGTTATTAGAGACGCAGTCACTTATACCGAACACGCAAAGAGAAAG 240 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || || || || | ||| | |||||||||||||| | ||||| | | |||| ||| Sbjct 241 ACCGTTACTTCTCTAGATGTTGTCTATGCATTGAAGAGACAAGGTAGAACCCTTTACGGT 300 Query 16688 TTTGGAAGTTA 16698 ||||| |||| Sbjct 301 TTTGGTGGTTA 311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79069907991084