Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq4829 239 5e-58 >seq4829 Length=1098 Score = 239 bits (264), Expect = 5e-58 Identities = 570/855 (67%), Gaps = 17/855 (2%) Strand=Plus/Minus Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304 |||||||| || ||||||||| | | ||| || | |||||| | | | | | Sbjct 1064 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 1005 Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364 | ||||||||| ||||| || | ||| |||||||| || || ||||||||||| ||| Sbjct 1004 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 945 Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATA 21424 || ||||| || || | || || | ||||| ||| |||||||| ||| || Sbjct 944 TTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGGCTTCGGTAATGATT 885 Query 21425 TTTATTATCCTAGAT--GTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAA 21482 | | | | | | || || |||| || || ||| ||| | |||||| |||| Sbjct 884 TGTCTGACAATTTTTTCGT-CT-GGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAA 827 Query 21483 AATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCA 21542 |||| ||| ||||||||||| |||| || | || || || || || ||||| |||| Sbjct 826 AATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCA 767 Query 21543 TTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCT 21602 | || ||||||||||| ||||| || || || ||||||| || || |||||||| || | Sbjct 766 TCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTT 707 Query 21603 CAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATT 21662 |||| ||||||||||| || || | || | | | |||||||| ||||||| Sbjct 706 CAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATT 647 Query 21663 TTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGA 21721 || ||||||| |||||||| || ||||| ||||| ||||| || || || |||| Sbjct 646 TTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 587 Query 21722 TGAtt-tttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGA 21780 ||| |||| | | ||| | ||| | ||| |||| || Sbjct 586 --ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGA 529 Query 21781 ATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAAC 21840 ||| || ||||| ||| || || || || || |||||| | ||||||| | |||||| Sbjct 528 ATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAAC 469 Query 21841 --CTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAA 21898 | | | ||| || | | | || |||||||| ||||| |||||| || ||||| Sbjct 468 ATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAG 411 Query 21899 AATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCT 21955 || || | | || || || ||| ||| || || | ||| || |||||||| Sbjct 410 AACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCA 351 Query 21956 AATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCA-AAAGCTAGCAATAGCCTTTTT 22014 |||||||| || | ||| | ||| || | ||||| |||| | || ||||| || Sbjct 350 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGAT-GCTTCTGCCTTCTT 292 Query 22015 ATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGATTC 22074 ||||| ||| || || | ||| | |||||||| | |||||||| | || ||| Sbjct 291 GTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCTTCTCTTGTTTTC 232 Query 22075 AACTAAAAGTGGTTC 22089 |||||||||||| Sbjct 231 CTTTAAAAGTGGTTC 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531862316977120