Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 239 5e-58
>seq4829
Length=1098
Score = 239 bits (264), Expect = 5e-58
Identities = 570/855 (67%), Gaps = 17/855 (2%)
Strand=Plus/Minus
Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304
|||||||| || ||||||||| | | ||| || | |||||| | | | | |
Sbjct 1064 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 1005
Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364
| ||||||||| ||||| || | ||| |||||||| || || ||||||||||| |||
Sbjct 1004 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 945
Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATA 21424
|| ||||| || || | || || | ||||| ||| |||||||| ||| ||
Sbjct 944 TTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGGCTTCGGTAATGATT 885
Query 21425 TTTATTATCCTAGAT--GTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAA 21482
| | | | | | || || |||| || || ||| ||| | |||||| ||||
Sbjct 884 TGTCTGACAATTTTTTCGT-CT-GGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAA 827
Query 21483 AATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCA 21542
|||| ||| ||||||||||| |||| || | || || || || || ||||| ||||
Sbjct 826 AATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCA 767
Query 21543 TTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCT 21602
| || ||||||||||| ||||| || || || ||||||| || || |||||||| || |
Sbjct 766 TCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTT 707
Query 21603 CAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATT 21662
|||| ||||||||||| || || | || | | | |||||||| |||||||
Sbjct 706 CAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATT 647
Query 21663 TTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGA 21721
|| ||||||| |||||||| || ||||| ||||| ||||| || || || ||||
Sbjct 646 TTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 587
Query 21722 TGAtt-tttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGA 21780
||| |||| | | ||| | ||| | ||| |||| ||
Sbjct 586 --ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGA 529
Query 21781 ATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAAC 21840
||| || ||||| ||| || || || || || |||||| | ||||||| | ||||||
Sbjct 528 ATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAAC 469
Query 21841 --CTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAA 21898
| | | ||| || | | | || |||||||| ||||| |||||| || |||||
Sbjct 468 ATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAG 411
Query 21899 AATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCT 21955
|| || | | || || || ||| ||| || || | ||| || ||||||||
Sbjct 410 AACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCA 351
Query 21956 AATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCA-AAAGCTAGCAATAGCCTTTTT 22014
|||||||| || | ||| | ||| || | ||||| |||| | || ||||| ||
Sbjct 350 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGAT-GCTTCTGCCTTCTT 292
Query 22015 ATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGATTC 22074
||||| ||| || || | ||| | |||||||| | |||||||| | || |||
Sbjct 291 GTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCTTCTCTTGTTTTC 232
Query 22075 AACTAAAAGTGGTTC 22089
||||||||||||
Sbjct 231 CTTTAAAAGTGGTTC 217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531862316977120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |