Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4829 167 6e-36 seq5022 154 4e-32 >seq4829 Length=1098 Score = 167 bits (184), Expect = 6e-36 Identities = 303/440 (69%), Gaps = 5/440 (1%) Strand=Plus/Plus Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273 ||||||| ||||||||| | | || |||||||| ||| ||| |||| ||||| Sbjct 401 TTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTGAGAATTTCT 460 Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333 || ||| ||||| |||||||| | |||||||||||| | ||||| ||||| |||| Sbjct 461 CAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAA 520 Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC 22393 | |||| ||||||| |||||| | || | | | | | ||||| | | ||| Sbjct 521 ACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAA- 579 Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGG 22452 | ||| ||||||| || ||| || || | || || ||| | ||||| || ||| Sbjct 580 AGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGG 639 Query 22453 GCGCTGAAATGGATGAACAATGAACGTTCATTC---GCGGAACGTCTTATTGCATTTGCT 22509 || | |||||||| || || | |||| || || | | | ||||||||| Sbjct 640 GCTTTAAAATGGATTGCAGATAAAGATGCATTGTTTGCAGAGAGGTTGGTGGCATTTGCT 699 Query 22510 GTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGT 22569 | |||||||| |||||||| ||||| ||||| | ||||| ||| | ||||| | Sbjct 700 GCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGA 759 Query 22570 GCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCAT 22629 | | ||||| ||| | ||||| || || ||| | ||| | ||||||| ||| | ||| Sbjct 760 GGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACAT 819 Query 22630 ACCGATTTTGCGTGTATGCT 22649 ||||||||||| ||| |||| Sbjct 820 ACCGATTTTGCTTGTTTGCT 839 >seq5022 Length=2556 Score = 154 bits (170), Expect = 4e-32 Identities = 542/832 (65%), Gaps = 32/832 (4%) Strand=Plus/Plus Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150 ||| | |||||||||||||||||||| | |||| ||| | || | |||||||| || Sbjct 136 GGTGTTTATGATGGTGTTACAACTGTCGAATTAGATAATTTAGCTGCTGAAACTGCTGCT 195 Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210 ||| |||| | | ||||| ||||| | | |||||||| | ||||| |||| Sbjct 196 TATATGACAACTATCCATCCAGATTATGCGGTATTGGCTGCTAGAGTTGCAATTTCAAAC 255 Query 363211 CTTCATAAAATGACATCAAATAAGTTTTCCAGTGTCATGGATAGTCTGTATAACTATGTC 363270 | || || ||| | || || || || || | || || |||| ||| | Sbjct 256 TTACAAAAGCAAACAACTAAGAAATTCTCTGAAGTTGTTAATCAACTATATACTTATATT 315 Query 363271 AATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCGT 363330 || | || | ||||| | ||| | ||| | | || | | ||| | ||| Sbjct 316 GATCCTAAAAATGGTAAACCTGCTCCAATGATTTCAAAGGAGACTTGGGAAATTGTCCAA 375 Query 363331 TCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA-TAT 363389 |||||| | | || ||||| | || ||||||| | || || | ||| | ||| Sbjct 376 AAAAATGCGAATATATTAGATGATGCAATTCATTATGATAGAGACTTCAATTATAACTAT 435 Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 ||| || | || || | || | || || | | || |||||| | |||| || Sbjct 436 TTT-GGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTGCCGA 494 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | | || || ||| | ||||| | ||||| ||||||| ||| | ||| ||||| | Sbjct 495 AAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTGATTC 554 Query 363510 CGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAA 363565 | |||||||| ||||| | || ||| | || | ||||| || || | |||| Sbjct 555 TGTTATTGAAACTTATAATTTGATGTCAAAGAG---GTAT-TTCACACATGCTTCTCCAA 610 Query 363566 CAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAA 363621 | | | |||| | || |||| | |||| | |||||||| || |||||| | | Sbjct 611 CTCTTTTCAATTCGGGTACTCCAAGAAATCAA---ATGTCTTCATG-TTTCTTAGTTGCA 666 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||||||||||||||| || ||||||| ||| || | || | |||||| | |||||| Sbjct 667 ATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTTCC 726 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG----TTA 363737 || | ||| || || ||||| || || || ||| || | | ||| | ||| Sbjct 727 AAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATC----AACTGGTTCTTA 782 Query 363738 CATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||| ||| || | || | | || |||||| | |||| ||| || | || ||| | | Sbjct 783 TATTGCCGGTACTAATGGTACA-TCCAATGGGATTATTCCAATGATTAGGGTCTTTAATA 841 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | ||||| ||||| || ||||| ||||| | |||| | || |||||||| | || Sbjct 842 ACACTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACC--TGGTGCGTTTGCACTATA 899 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 | | |||||| ||| | |||||| |||| ||| |||| || |||||||| Sbjct 900 TATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAAC 951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303256944926216