Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 167 6e-36
seq5022 154 4e-32
>seq4829
Length=1098
Score = 167 bits (184), Expect = 6e-36
Identities = 303/440 (69%), Gaps = 5/440 (1%)
Strand=Plus/Plus
Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273
||||||| ||||||||| | | || |||||||| ||| ||| |||| |||||
Sbjct 401 TTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTGAGAATTTCT 460
Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333
|| ||| ||||| |||||||| | |||||||||||| | ||||| ||||| ||||
Sbjct 461 CAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAA 520
Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC 22393
| |||| ||||||| |||||| | || | | | | | ||||| | | |||
Sbjct 521 ACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAA- 579
Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGG 22452
| ||| ||||||| || ||| || || | || || ||| | ||||| || |||
Sbjct 580 AGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGG 639
Query 22453 GCGCTGAAATGGATGAACAATGAACGTTCATTC---GCGGAACGTCTTATTGCATTTGCT 22509
|| | |||||||| || || | |||| || || | | | |||||||||
Sbjct 640 GCTTTAAAATGGATTGCAGATAAAGATGCATTGTTTGCAGAGAGGTTGGTGGCATTTGCT 699
Query 22510 GTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGT 22569
| |||||||| |||||||| ||||| ||||| | ||||| ||| | ||||| |
Sbjct 700 GCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGA 759
Query 22570 GCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCAT 22629
| | ||||| ||| | ||||| || || ||| | ||| | ||||||| ||| | |||
Sbjct 760 GGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACAT 819
Query 22630 ACCGATTTTGCGTGTATGCT 22649
||||||||||| ||| ||||
Sbjct 820 ACCGATTTTGCTTGTTTGCT 839
>seq5022
Length=2556
Score = 154 bits (170), Expect = 4e-32
Identities = 542/832 (65%), Gaps = 32/832 (4%)
Strand=Plus/Plus
Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150
||| | |||||||||||||||||||| | |||| ||| | || | |||||||| ||
Sbjct 136 GGTGTTTATGATGGTGTTACAACTGTCGAATTAGATAATTTAGCTGCTGAAACTGCTGCT 195
Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210
||| |||| | | ||||| ||||| | | |||||||| | ||||| ||||
Sbjct 196 TATATGACAACTATCCATCCAGATTATGCGGTATTGGCTGCTAGAGTTGCAATTTCAAAC 255
Query 363211 CTTCATAAAATGACATCAAATAAGTTTTCCAGTGTCATGGATAGTCTGTATAACTATGTC 363270
| || || ||| | || || || || || | || || |||| ||| |
Sbjct 256 TTACAAAAGCAAACAACTAAGAAATTCTCTGAAGTTGTTAATCAACTATATACTTATATT 315
Query 363271 AATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCGT 363330
|| | || | ||||| | ||| | ||| | | || | | ||| | |||
Sbjct 316 GATCCTAAAAATGGTAAACCTGCTCCAATGATTTCAAAGGAGACTTGGGAAATTGTCCAA 375
Query 363331 TCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA-TAT 363389
|||||| | | || ||||| | || ||||||| | || || | ||| | |||
Sbjct 376 AAAAATGCGAATATATTAGATGATGCAATTCATTATGATAGAGACTTCAATTATAACTAT 435
Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449
||| || | || || | || | || || | | || |||||| | |||| ||
Sbjct 436 TTT-GGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTGCCGA 494
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
| | || || ||| | ||||| | ||||| ||||||| ||| | ||| ||||| |
Sbjct 495 AAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTGATTC 554
Query 363510 CGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAA 363565
| |||||||| ||||| | || ||| | || | ||||| || || | ||||
Sbjct 555 TGTTATTGAAACTTATAATTTGATGTCAAAGAG---GTAT-TTCACACATGCTTCTCCAA 610
Query 363566 CAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAA 363621
| | | |||| | || |||| | |||| | |||||||| || |||||| | |
Sbjct 611 CTCTTTTCAATTCGGGTACTCCAAGAAATCAA---ATGTCTTCATG-TTTCTTAGTTGCA 666
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||||||||||||||||| || ||||||| ||| || | || | |||||| | ||||||
Sbjct 667 ATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTTCC 726
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG----TTA 363737
|| | ||| || || ||||| || || || ||| || | | ||| | |||
Sbjct 727 AAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATC----AACTGGTTCTTA 782
Query 363738 CATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796
||| ||| || | || | | || |||||| | |||| ||| || | || ||| | |
Sbjct 783 TATTGCCGGTACTAATGGTACA-TCCAATGGGATTATTCCAATGATTAGGGTCTTTAATA 841
Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854
| ||||| ||||| || ||||| ||||| | |||| | || |||||||| | ||
Sbjct 842 ACACTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACC--TGGTGCGTTTGCACTATA 899
Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906
| | |||||| ||| | |||||| |||| ||| |||| || ||||||||
Sbjct 900 TATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAAC 951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303256944926216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |