Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4829 309 4e-79 seq5022 206 3e-48 >seq4829 Length=1098 Score = 309 bits (342), Expect = 4e-79 Identities = 572/833 (69%), Gaps = 12/833 (1%) Strand=Plus/Minus Query 32421 GATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAAT 32480 || || || ||||| || ||||||||||| ||||| | || | |||| | | || ||| Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014 Query 32481 TCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 32540 || | | ||||||||| ||||| || | ||| ||||| || |||||| Sbjct 1013 GCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATA 954 Query 32541 CCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTC 32599 || | | || || || || || |||| ||| | |||| ||||||| || || || Sbjct 953 CCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTC 895 Query 32600 TGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAA 32659 || || || ||| || ||| ||| || | || |||||| ||| | ||| Sbjct 894 GGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAA 835 Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| || |||||| |||| ||| || ||||||| ||| | |||||||| ||||| | Sbjct 834 ACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAA 775 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| | || | |||||| | ||| || ||||| |||||||| ||||| ||||| Sbjct 774 ACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAA 715 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT-- 32837 ||| ||||| || || ||||| || | | |||||| || | || | || | Sbjct 714 AATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGC 655 Query 32838 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| ||| |||||| |||||||| | || | ||| || ||||| || || ||||| Sbjct 654 AATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATT 595 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 || | | | |||| || |||||| | || ||||||||||| | | ||| | Sbjct 594 GAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGT 535 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 |||||||||||||||||| || ||||| || || ||||| ||| ||||||| | ||| Sbjct 534 TTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAAT 475 Query 33017 CTGTACTTCTGT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074 || || || | | ||| || || ||||||||||||| ||||| || ||| || Sbjct 474 TTGAACATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCA 417 Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTC 33131 ||||| ||||| | || | || || || |||| | | | | | || ||| Sbjct 416 GCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTC 357 Query 33132 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33191 ||||||| | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||| Sbjct 356 CAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCC 297 Query 33192 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244 || || ||||| | ||| || || ||||| | |||||||| | |||||| || Sbjct 296 TTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 >seq5022 Length=2556 Score = 206 bits (228), Expect = 3e-48 Identities = 772/1196 (65%), Gaps = 33/1196 (3%) Strand=Plus/Minus Query 61843 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 61902 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 2184 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 2125 Query 61903 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 61962 || || || |||| || || |||||||| ||||| ||| | |||| Sbjct 2124 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 2065 Query 61963 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62022 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 2064 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 2005 Query 62023 TTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62081 | ||||| |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 2004 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 1946 Query 62082 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62138 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 1945 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 1886 Query 62139 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 62198 ||||||||| | | | || |||| |||| | | || || || || | || | Sbjct 1885 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 1826 Query 62199 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 62258 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 1825 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 1766 Query 62259 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62318 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 1765 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 1706 Query 62319 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 62376 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 1705 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 1646 Query 62377 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62436 | || ||||| | ||| | || |||||| || | || Sbjct 1645 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 1588 Query 62437 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62496 || |||||||| ||| | || || |||| ||| ||||| || ||| | | |||||| Sbjct 1587 CTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 1528 Query 62497 GGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAAT-TTA 62555 |||||| || || | |||| || || | ||||| | ||||||||| |||| | | Sbjct 1527 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 1469 Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615 | | || || || ||||| || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 1468 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 1409 Query 62616 TAGA---GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-GAGA 62671 | || || ||| ||| || |||||| || || |||| || |||||||| || Sbjct 1408 TTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 1352 Query 62672 TTTCTGACAATTACTTTG--ACCACAT---CCTTC----AGTTTGAGAAAATCAAATC-G 62721 ||| | || ||||| | ||| |||| |||| | | | || || Sbjct 1351 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTT--ATACCAACAGTTCTT 1294 Query 62722 CCCATCTATTACAA-ACATG--TTCAATGCAACAGATGCCAGATTACAAACGGCTACCTC 62778 |||| || ||| | ||| |||||||||| || | ||||||||| ||| || Sbjct 1293 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 1234 Query 62779 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 62838 | || | ||||| | || ||| ||| | ||| | | ||||| || || Sbjct 1233 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 1174 Query 62839 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 62898 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 1173 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 1114 Query 62899 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 62958 |||| | |||| ||||| |||| | ||| | | | || || ||| | || Sbjct 1113 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 1054 Query 62959 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACAT 63014 ||| ||||||||| ||| ||||| ||| || ||| || || || | |||| Sbjct 1053 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACAT 998 Score = 201 bits (222), Expect = 1e-46 Identities = 518/786 (66%), Gaps = 6/786 (1%) Strand=Plus/Minus Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 |||||| |||||||| || || | |||| || | | ||||| | ||| || || || Sbjct 924 AATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACC 865 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 || || | || || || ||||||||| | || || | |||||||||||| |||||||| Sbjct 864 TTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGA 805 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63351 ||||||||| || || | ||||| ||| | | | ||||||| || || || Sbjct 804 TGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCC 745 Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411 || || || || |||| || || || || ||| ||| || ||||||||||| || || Sbjct 744 AATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTC 685 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63471 || ||| ||| |||| || || ||||| ||||||||| | | ||| || Sbjct 684 AATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACC 625 Query 63472 CGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63531 || ||| || | || |||||||| || || || | | | || | | ||| || || Sbjct 624 CGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGT 565 Query 63532 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63591 |||||| | || || ||||| |||||| || || || || | ||||| | || Sbjct 564 TTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATG 505 Query 63592 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63651 || || ||||| | ||||| |||||| | || | || |||| || ||||| Sbjct 504 TTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTT 445 Query 63652 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 63711 |||||||||||||| || ||||||| || ||| ||| | | | | ||| Sbjct 444 GAAACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATT 385 Query 63712 CTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATT 63771 | || ||| | || | ||| || ||||||| || ||| | |||| ||||| Sbjct 384 CGCATTTTTTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATT 325 Query 63772 TTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 63831 |||||||| | ||| | ||| | | | |||||| ||| || |||||| Sbjct 324 TTTAGGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTG 265 Query 63832 TTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG--TTG- 63888 || |||| ||||| | || | |||||| || | | |||||||| ||||| | | Sbjct 264 CTTTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGT 205 Query 63889 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACC 63948 ||| || || || || |||| || || | | | || ||||| || ||||| ||||| Sbjct 204 TGTCATATAA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACC 148 Query 63949 ATTATA 63954 || ||| Sbjct 147 ATCATA 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633586156724800