Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 309 4e-79
seq5022 206 3e-48
>seq4829
Length=1098
Score = 309 bits (342), Expect = 4e-79
Identities = 572/833 (69%), Gaps = 12/833 (1%)
Strand=Plus/Minus
Query 32421 GATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAAT 32480
|| || || ||||| || ||||||||||| ||||| | || | |||| | | || |||
Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014
Query 32481 TCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 32540
|| | | ||||||||| ||||| || | ||| ||||| || ||||||
Sbjct 1013 GCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATA 954
Query 32541 CCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTC 32599
|| | | || || || || || |||| ||| | |||| ||||||| || || ||
Sbjct 953 CCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTC 895
Query 32600 TGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAA 32659
|| || || ||| || ||| ||| || | || |||||| ||| | |||
Sbjct 894 GGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAA 835
Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719
||| || |||||| |||| ||| || ||||||| ||| | |||||||| ||||| |
Sbjct 834 ACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAA 775
Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779
|| ||||| | || | |||||| | ||| || ||||| |||||||| ||||| |||||
Sbjct 774 ACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAA 715
Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT-- 32837
||| ||||| || || ||||| || | | |||||| || | || | || |
Sbjct 714 AATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGC 655
Query 32838 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896
||||| ||| |||||| |||||||| | || | ||| || ||||| || || |||||
Sbjct 654 AATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATT 595
Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956
|| | | | |||| || |||||| | || ||||||||||| | | ||| |
Sbjct 594 GAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGT 535
Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016
|||||||||||||||||| || ||||| || || ||||| ||| ||||||| | |||
Sbjct 534 TTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAAT 475
Query 33017 CTGTACTTCTGT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074
|| || || | | ||| || || ||||||||||||| ||||| || ||| ||
Sbjct 474 TTGAACATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCA 417
Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTC 33131
||||| ||||| | || | || || || |||| | | | | | || |||
Sbjct 416 GCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTC 357
Query 33132 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33191
||||||| | |||||| || | ||| | ||| ||| | ||||| || ||||| ||||||
Sbjct 356 CAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCC 297
Query 33192 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244
|| || ||||| | ||| || || ||||| | |||||||| | |||||| ||
Sbjct 296 TTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244
>seq5022
Length=2556
Score = 206 bits (228), Expect = 3e-48
Identities = 772/1196 (65%), Gaps = 33/1196 (3%)
Strand=Plus/Minus
Query 61843 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 61902
||| | |||||||||||| | || | || | | || | || || ||||| || ||
Sbjct 2184 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 2125
Query 61903 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 61962
|| || || |||| || || |||||||| ||||| ||| | ||||
Sbjct 2124 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 2065
Query 61963 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62022
| | |||||| ||||||||||| ||||| | | | || || || || ||||||||
Sbjct 2064 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 2005
Query 62023 TTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62081
| ||||| |||||||| | || ||||| | ||| ||||| || || ||| || ||||
Sbjct 2004 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 1946
Query 62082 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62138
|||| || | || |||||||| || ||| ||||| || || || || ||
Sbjct 1945 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 1886
Query 62139 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 62198
||||||||| | | | || |||| |||| | | || || || || | || |
Sbjct 1885 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 1826
Query 62199 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 62258
|||| || | || ||||| | || ||||||||| || || ||||| | | || |
Sbjct 1825 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 1766
Query 62259 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62318
| | || | |||||||| ||||| ||||||||||| ||||| || | || |||||
Sbjct 1765 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 1706
Query 62319 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 62376
| | ||| | | ||||||| || |||| | ||||| | | | | | ||
Sbjct 1705 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 1646
Query 62377 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62436
| || ||||| | ||| | || |||||| || | ||
Sbjct 1645 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 1588
Query 62437 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62496
|| |||||||| ||| | || || |||| ||| ||||| || ||| | | ||||||
Sbjct 1587 CTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 1528
Query 62497 GGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAAT-TTA 62555
|||||| || || | |||| || || | ||||| | ||||||||| |||| | |
Sbjct 1527 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 1469
Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615
| | || || || ||||| || ||||| ||||||| | | || ||||| | |||| |||
Sbjct 1468 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 1409
Query 62616 TAGA---GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-GAGA 62671
| || || ||| ||| || |||||| || || |||| || |||||||| ||
Sbjct 1408 TTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 1352
Query 62672 TTTCTGACAATTACTTTG--ACCACAT---CCTTC----AGTTTGAGAAAATCAAATC-G 62721
||| | || ||||| | ||| |||| |||| | | | || ||
Sbjct 1351 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTT--ATACCAACAGTTCTT 1294
Query 62722 CCCATCTATTACAA-ACATG--TTCAATGCAACAGATGCCAGATTACAAACGGCTACCTC 62778
|||| || ||| | ||| |||||||||| || | ||||||||| ||| ||
Sbjct 1293 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 1234
Query 62779 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 62838
| || | ||||| | || ||| ||| | ||| | | ||||| || ||
Sbjct 1233 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 1174
Query 62839 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 62898
||||||||||||| || |||||||| ||||||||||| | ||||| || ||||||||
Sbjct 1173 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 1114
Query 62899 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 62958
|||| | |||| ||||| |||| | ||| | | | || || ||| | ||
Sbjct 1113 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 1054
Query 62959 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACAT 63014
||| ||||||||| ||| ||||| ||| || ||| || || || | ||||
Sbjct 1053 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACAT 998
Score = 201 bits (222), Expect = 1e-46
Identities = 518/786 (66%), Gaps = 6/786 (1%)
Strand=Plus/Minus
Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231
|||||| |||||||| || || | |||| || | | ||||| | ||| || || ||
Sbjct 924 AATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACC 865
Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291
|| || | || || || ||||||||| | || || | |||||||||||| ||||||||
Sbjct 864 TTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGA 805
Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63351
||||||||| || || | ||||| ||| | | | ||||||| || || ||
Sbjct 804 TGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCC 745
Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411
|| || || || |||| || || || || ||| ||| || ||||||||||| || ||
Sbjct 744 AATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTC 685
Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63471
|| ||| ||| |||| || || ||||| ||||||||| | | ||| ||
Sbjct 684 AATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACC 625
Query 63472 CGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63531
|| ||| || | || |||||||| || || || | | | || | | ||| || ||
Sbjct 624 CGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGT 565
Query 63532 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63591
|||||| | || || ||||| |||||| || || || || | ||||| | ||
Sbjct 564 TTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATG 505
Query 63592 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63651
|| || ||||| | ||||| |||||| | || | || |||| || |||||
Sbjct 504 TTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTT 445
Query 63652 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 63711
|||||||||||||| || ||||||| || ||| ||| | | | | |||
Sbjct 444 GAAACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATT 385
Query 63712 CTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATT 63771
| || ||| | || | ||| || ||||||| || ||| | |||| |||||
Sbjct 384 CGCATTTTTTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATT 325
Query 63772 TTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 63831
|||||||| | ||| | ||| | | | |||||| ||| || ||||||
Sbjct 324 TTTAGGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTG 265
Query 63832 TTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG--TTG- 63888
|| |||| ||||| | || | |||||| || | | |||||||| ||||| | |
Sbjct 264 CTTTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGT 205
Query 63889 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACC 63948
||| || || || || |||| || || | | | || ||||| || ||||| |||||
Sbjct 204 TGTCATATAA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACC 148
Query 63949 ATTATA 63954
|| |||
Sbjct 147 ATCATA 142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633586156724800
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