Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2706 159 3e-34 seq2598 159 3e-34 seq730 150 2e-31 >seq2706 Length=450 Score = 159 bits (176), Expect = 3e-34 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||||| || ||||| | || || | ||||| ||||| ||| Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| || || ||| |||||| ||||| ||||| ||||||||||||| Sbjct 61 GACACTATCGA--CAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACC 118 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | |||| ||||| || || ||||||||||||| | | ||| || || |||| Sbjct 119 AACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACA 178 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||| ||||| || || || ||||| | || ||||||| || Sbjct 179 ACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 227 >seq2598 Length=450 Score = 159 bits (176), Expect = 3e-34 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||||| || ||||| | || || | ||||| ||||| ||| Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| || || ||| |||||| ||||| ||||| ||||||||||||| Sbjct 61 GACACTATCGA--CAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACC 118 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | |||| ||||| || || ||||||||||||| | | ||| || || |||| Sbjct 119 AACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACA 178 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||| ||||| || || || ||||| | || ||||||| || Sbjct 179 ACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 227 >seq730 Length=387 Score = 150 bits (166), Expect = 2e-31 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| || |||||||| |||| || | ||||| || || ||| Sbjct 1 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 60 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || |||||||| ||| || || ||||| ||||||||||||| Sbjct 61 GACACCATCGA--CAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACC 118 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | |||| ||||| || || ||||||||||||| | | ||| | ||| |||| Sbjct 119 AACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACA 178 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| ||||| || || || || || | || | ||||| || Sbjct 179 ACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433297432501220