Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4829 334 8e-87 >seq4829 Length=1098 Score = 334 bits (370), Expect = 8e-87 Identities = 552/779 (71%), Gaps = 37/779 (5%) Strand=Plus/Minus Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976 || || |||||| || ||||| || | |||||| |||||||||| |||||| || || Sbjct 1008 CAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAG 949 Query 92977 -AAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTACAACGGCTTCTTTC 93034 ||| | |||||||| ||||| || ||| | ||||| || || |||||||||| | Sbjct 948 CAAGTTG-ACAGGTAGGGCGTCAGTGAAGTATCTCTTT-TCAATATCAACGGCTTCGGTA 891 Query 93035 AAGATTTCTATTACTCTACTATTTGGT---GGTTTTTGTACGACATAATTGT----ACAT 93087 | ||||| | | || | | ||| || || | | || | || ||| | | Sbjct 890 ATGATTTGTCTGACAAT--TTTTTCGTCTGGGGTATGGTTC-----AAATGTGAAAAGAG 838 Query 93088 TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGT 93147 || || ||||| ||||||||||||||||| |||| | |||| ||| ||| ||| || Sbjct 837 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 778 Query 93148 TAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaa 93207 |||||||| | || |||| || || | ||| || || || ||||| |||||| || Sbjct 777 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 718 Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-C 93266 || |||||||| || || ||||||||||| | | || ||||| ||| ||| | Sbjct 717 GAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATC 658 Query 93267 TGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326 ||| ||||||||||||||||| ||||| |||| ||| ||||| || | |||||| || | Sbjct 657 TGCA-ATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTG 599 Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 | || |||| | | || | || | | |||| ||||| ||||| || || | ||||| Sbjct 598 CATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAAT 539 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 | |||| ||||| | || ||||| ||||||||| || ||||||||| |||| || | Sbjct 538 AAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTG 479 Query 93447 TGATCTGCACTTC--TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504 || || || || |||||||| |||| || | ||||||||||||||||||||| || Sbjct 478 GAATTTGAACATCACTTGAGAAATTCTCA--ACTAAATTTTCATTGACTATACCATCAGA 421 Query 93505 TGCTGCaaaaaaaGCCAATATATGCTTTATAAAATG-----TTTCTCATCATC-TTTAAG 93558 || ||||| || || || | || | | ||||| | | |||| || || || Sbjct 420 AGCAGCAAAGAACGC---TAGA-ACTCT-TGAAATGAAGAATCTTTCATTTTCGTTCAAT 366 Query 93559 C--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616 | || | |||||| | |||||| || ||||| | ||| || ||||||| || ||| Sbjct 365 CTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGAT 306 Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 |||||||| || |||||||| | ||| || || ||||| | |||||||| | ||||| Sbjct 305 GCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAA 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556820511121120