Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 334 8e-87
>seq4829
Length=1098
Score = 334 bits (370), Expect = 8e-87
Identities = 552/779 (71%), Gaps = 37/779 (5%)
Strand=Plus/Minus
Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976
|| || |||||| || ||||| || | |||||| |||||||||| |||||| || ||
Sbjct 1008 CAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAG 949
Query 92977 -AAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTACAACGGCTTCTTTC 93034
||| | |||||||| ||||| || ||| | ||||| || || |||||||||| |
Sbjct 948 CAAGTTG-ACAGGTAGGGCGTCAGTGAAGTATCTCTTT-TCAATATCAACGGCTTCGGTA 891
Query 93035 AAGATTTCTATTACTCTACTATTTGGT---GGTTTTTGTACGACATAATTGT----ACAT 93087
| ||||| | | || | | ||| || || | | || | || ||| | |
Sbjct 890 ATGATTTGTCTGACAAT--TTTTTCGTCTGGGGTATGGTTC-----AAATGTGAAAAGAG 838
Query 93088 TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGT 93147
|| || ||||| ||||||||||||||||| |||| | |||| ||| ||| ||| ||
Sbjct 837 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 778
Query 93148 TAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaa 93207
|||||||| | || |||| || || | ||| || || || ||||| |||||| ||
Sbjct 777 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 718
Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-C 93266
|| |||||||| || || ||||||||||| | | || ||||| ||| ||| |
Sbjct 717 GAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATC 658
Query 93267 TGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326
||| ||||||||||||||||| ||||| |||| ||| ||||| || | |||||| || |
Sbjct 657 TGCA-ATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTG 599
Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386
| || |||| | | || | || | | |||| ||||| ||||| || || | |||||
Sbjct 598 CATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAAT 539
Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446
| |||| ||||| | || ||||| ||||||||| || ||||||||| |||| || |
Sbjct 538 AAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTG 479
Query 93447 TGATCTGCACTTC--TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504
|| || || || |||||||| |||| || | ||||||||||||||||||||| ||
Sbjct 478 GAATTTGAACATCACTTGAGAAATTCTCA--ACTAAATTTTCATTGACTATACCATCAGA 421
Query 93505 TGCTGCaaaaaaaGCCAATATATGCTTTATAAAATG-----TTTCTCATCATC-TTTAAG 93558
|| ||||| || || || | || | | ||||| | | |||| || || ||
Sbjct 420 AGCAGCAAAGAACGC---TAGA-ACTCT-TGAAATGAAGAATCTTTCATTTTCGTTCAAT 366
Query 93559 C--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616
| || | |||||| | |||||| || ||||| | ||| || ||||||| || |||
Sbjct 365 CTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGAT 306
Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675
|||||||| || |||||||| | ||| || || ||||| | |||||||| | |||||
Sbjct 305 GCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAA 247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556820511121120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |