Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4829 102 2e-16 >seq4829 Length=1098 Score = 102 bits (112), Expect = 2e-16 Identities = 172/244 (70%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 42612 TTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGG 42671 ||||| || || || || || || || |||||| | ||||| || ||||| | || ||| Sbjct 592 TTCAATGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCTTTAAAATGG 651 Query 42672 ATCG-AGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGG 42730 || | ||| | || ||| ||| | |||||| |||| || ||| | || || || || Sbjct 652 ATTGCAGA-TAAAGATGCATTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGG 710 Query 42731 CATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGC 42789 || |||||||| || | || || |||||||||||| | || ||| |||| | ||||| Sbjct 711 TATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGT-TTGATGC 769 Query 42790 CCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTG 42849 | || | || ||||| ||||| || || | || || || || | |||| || |||| Sbjct 770 CAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTG 829 Query 42850 CCTG 42853 | || Sbjct 830 CTTG 833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944270877058880