Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5022 196 6e-45 seq4829 100 3e-16 >seq5022 Length=2556 Score = 196 bits (216), Expect = 6e-45 Identities = 684/1051 (65%), Gaps = 34/1051 (3%) Strand=Plus/Minus Query 113600 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAAC 113659 ||||| ||||| || ||||||||||||| |||||| |||| | |||||| || | || Sbjct 2141 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 2082 Query 113660 TTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 113719 || | ||||||| ||| || || ||||||| ||| || ||||| | | | Sbjct 2081 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 2022 Query 113720 CCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAG 113779 || | ||| || |||||||| || | ||| | ||| ||||| ||||| | || Sbjct 2021 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 1962 Query 113780 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACC 113839 | || ||| || || | || |||| | | || || || || ||| | || Sbjct 1961 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 1902 Query 113840 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTCCACGAG 113895 || | | |||||| || || |||||| || || | | ||| ||| || | Sbjct 1901 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-AT 1846 Query 113896 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCG 113954 || ||||||| || ||||| || | | ||| ||| || ||||||| | Sbjct 1845 ATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 1787 Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014 |||| || |||||||| || |||| ||| | ||||| | || || || || ||||| | Sbjct 1786 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 1727 Query 114015 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCC 114074 |||| | || | || | | ||| || || | || ||||| | | |||| Sbjct 1726 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 1667 Query 114075 AGTCGTAGTTGAGCT--TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 114132 |||| || | || | ||| || | ||| | ||||||||| |||| ||||||||| Sbjct 1666 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 1609 Query 114133 GGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 114190 || || ||||| ||||| ||||| ||||| || || ||| | ||||| || Sbjct 1608 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATAGATAATTCAACACTT 1551 Query 114191 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 114250 ||||| | || || ||||| || || |||||||| || ||||| | |||| || || Sbjct 1550 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 1491 Query 114251 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 114310 |||||||| | | || ||| || || |||| || | |||||||||||| | Sbjct 1490 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 1431 Query 114311 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 114370 ||||||| | | ||||||||| || | | || || || || ||||| | || ||| Sbjct 1430 GCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTA 1371 Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC---G 114427 ||||| | |||| | ||||| || ||||||||||| |||||||| | ||| || | Sbjct 1370 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAG 1311 Query 114428 TAAT--CAAAACTGCGAGTC-TC---TTCATTGACATACTTAGGAAGGGCGATTGACGCC 114481 | || ||| | | | ||| || |||| ||| | ||| | || | || Sbjct 1310 TTATACCAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCT 1254 Query 114482 AGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTATAATTTCCGTACACAAAT 114539 | |||||| || | || || || | || | || || | |||||| || |||| Sbjct 1253 AAATTACAAACTGCTGTTTCCTCAGGTGAT--GAATATTCAACAATTTCACAGCATAAAT 1196 Query 114540 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 114599 | ||| || || ||||| || | |||||| || || ||||||| |||||||| | Sbjct 1195 TGGAAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTAT 1136 Query 114600 AAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630 | | |||| | || || || || || ||||| Sbjct 1135 ATAACATGAAAGGTGTACCAGTTTCAGTTTG 1105 >seq4829 Length=1098 Score = 100 bits (110), Expect = 3e-16 Identities = 356/542 (66%), Gaps = 21/542 (4%) Strand=Plus/Minus Query 126080 ATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 126139 || || || || ||||| || |||||||| | ||| | ||| ||||||||||| || Sbjct 797 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 738 Query 126140 GCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCA 126199 | ||||||||| |||||||| || || || ||| || || || | | | ||| Sbjct 737 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 678 Query 126200 GCAAAGGAGCGCGACTTTGTGT-CAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGAT 126258 ||||| | || |||| | | ||| ||| || | ||||| | ||||||| || ||| Sbjct 677 GCAAA-CAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGAT 619 Query 126259 ACACGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 126315 ||| |||| || | || || || | |||| ||| |||| || |||||||||||| Sbjct 618 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 562 Query 126316 GTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTT-CATTATGGCACTGAT 126374 ||| |||| || | | ||||| ||||| || | ||| ||| || || Sbjct 561 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 503 Query 126375 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAAATTGTTATTGATAT 126434 || | |||||| | || || || || || ||| | ||||| | | | || Sbjct 502 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 443 Query 126435 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 126491 | ||| || || ||||| || ||||||| ||||| || | | | | | |||| Sbjct 442 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 383 Query 126492 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCT 126548 | |||||| ||||||| | ||||| || | | ||| || |||||||| | | Sbjct 382 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 326 Query 126549 CCTCCGCAGTCCA-ATTGCTCATTTGAGCCTTCTTATAGAGTTCCCAAAGGTGGGGATAC 126607 ||||||||||||| | | | || |||||||| || | || ||||| | | ||||| Sbjct 325 CCTCCGCAGTCCAGAAAGAT-GCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATAC 267 Query 126608 TT 126609 || Sbjct 266 TT 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597310381467040