Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq730 105 7e-18 seq2706 100 3e-16 seq2598 100 3e-16 >seq730 Length=387 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || | |||| || ||||| ||||| |||||||| || | Sbjct 228 ACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGA 169 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | ||||| || ||| | || || | || ||||| || || Sbjct 168 TAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGG 109 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || |||||||| ||| || | || ||| | || || Sbjct 108 AATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAAC 49 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | |||||| ||||| || || || || ||||||||||| Sbjct 48 TTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 1 >seq2706 Length=450 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | |||| |||| || ||||| |||||||||||||| || | | || | Sbjct 218 AATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTA 159 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | ||||| | ||||| || ||| | || || | || ||||| || ||||| ||||| Sbjct 158 CCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCC 99 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| ||||| ||| ||| || | || ||| | || ||||||| || Sbjct 98 TTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTA 39 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | ||||| || || |||||||| || ||||||||||| Sbjct 38 ATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1 >seq2598 Length=450 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | |||| |||| || ||||| |||||||||||||| || | | || | Sbjct 218 AATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTA 159 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | ||||| | ||||| || ||| | || || | || ||||| || ||||| ||||| Sbjct 158 CCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCC 99 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| ||||| ||| ||| || | || ||| | || ||||||| || Sbjct 98 TTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTA 39 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | ||||| || || |||||||| || ||||||||||| Sbjct 38 ATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499608650698720