Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq5022 185 1e-41
seq4829 100 3e-16
>seq5022
Length=2556
Score = 185 bits (204), Expect = 1e-41
Identities = 549/836 (66%), Gaps = 18/836 (2%)
Strand=Plus/Minus
Query 115561 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 115620
||||| ||||| || ||||||||||||| |||||| |||| | |||||| || | ||
Sbjct 2141 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 2082
Query 115621 TTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 115680
|| | ||||||| ||| || || ||||||| ||| || ||||| | | |
Sbjct 2081 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 2022
Query 115681 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAG 115740
|| | ||| || |||||||| || | ||| | ||| ||||| ||||| | ||
Sbjct 2021 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 1962
Query 115741 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACC 115800
| || ||| || || | || |||| | | || || || || ||| | ||
Sbjct 1961 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 1902
Query 115801 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTCTTGAGATC-CTCCACGAG 115856
|| | | |||||| || || |||||| || || | | ||| ||| || |
Sbjct 1901 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-AT 1846
Query 115857 GTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCG 115915
| ||||||| || ||||| || | | ||| ||| || || |||| |
Sbjct 1845 ATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 1787
Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975
|||| || |||||||| || |||| ||| | ||||| | ||| || || || ||||| |
Sbjct 1786 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 1727
Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035
|||| | || | || | | ||| || | || ||||| | | ||||
Sbjct 1726 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 1667
Query 116036 AGTCGTAGTTGAGCT--TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093
|||| || | || | ||| || | |||| | ||||||||| |||| |||||||||
Sbjct 1666 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 1609
Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 116151
|| || ||||| ||||| ||||||||||| || || ||| | ||||| ||
Sbjct 1608 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATAGATAATTCAACACTT 1551
Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 116211
||||| | || || ||||| || || |||||||| || ||||| | |||| || ||
Sbjct 1550 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 1491
Query 116212 TCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 116271
|||||||| | | | ||| || || |||| || | |||||||||||| |
Sbjct 1490 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 1431
Query 116272 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 116331
||||||| | | ||||||||| || | | || || || || ||||| | || |||
Sbjct 1430 GCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTA 1371
Query 116332 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387
||||| | |||| | ||||| || ||||||||||| |||||||| | ||| ||
Sbjct 1370 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTC 1315
>seq4829
Length=1098
Score = 100 bits (110), Expect = 3e-16
Identities = 325/493 (66%), Gaps = 19/493 (4%)
Strand=Plus/Minus
Query 127553 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 127612
|| || || || ||||| || ||||||||| | ||| | ||| ||||||||||| ||
Sbjct 797 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 738
Query 127613 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCTCG 127672
| |||||| ||||||||||| || || || ||| || || || | | | |||
Sbjct 737 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 678
Query 127673 GCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGAT 127731
||||| | | |||| | | ||| ||| || | ||||| | ||||||| || |||
Sbjct 677 GCAAA-CAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGAT 619
Query 127732 ACATGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 127788
|||||||| || | || || || | |||| ||| |||| || ||||||||||||
Sbjct 618 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 562
Query 127789 GTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTT-CATTATGGCACTGAT 127847
||| |||| || | | ||||| ||||| || | ||| ||| || ||
Sbjct 561 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 503
Query 127848 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAAATTGTTATTGATAT 127907
|| | |||||| | || || || || || ||| | ||||| | | | ||
Sbjct 502 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 443
Query 127908 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 127964
| ||| || || ||||| || ||||||| ||||| || | | | | | ||||
Sbjct 442 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 383
Query 127965 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCT 128021
| |||||| ||||||| | ||||| || | | ||| || |||||||| | |
Sbjct 382 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 326
Query 128022 CCTCCGCAGTCCA 128034
|||||||||||||
Sbjct 325 CCTCCGCAGTCCA 313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613462812754080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |