Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5022 185 1e-41 seq4829 100 3e-16 >seq5022 Length=2556 Score = 185 bits (204), Expect = 1e-41 Identities = 549/836 (66%), Gaps = 18/836 (2%) Strand=Plus/Minus Query 115561 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 115620 ||||| ||||| || ||||||||||||| |||||| |||| | |||||| || | || Sbjct 2141 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 2082 Query 115621 TTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 115680 || | ||||||| ||| || || ||||||| ||| || ||||| | | | Sbjct 2081 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 2022 Query 115681 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAG 115740 || | ||| || |||||||| || | ||| | ||| ||||| ||||| | || Sbjct 2021 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 1962 Query 115741 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACC 115800 | || ||| || || | || |||| | | || || || || ||| | || Sbjct 1961 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 1902 Query 115801 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTCTTGAGATC-CTCCACGAG 115856 || | | |||||| || || |||||| || || | | ||| ||| || | Sbjct 1901 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-AT 1846 Query 115857 GTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCG 115915 | ||||||| || ||||| || | | ||| ||| || || |||| | Sbjct 1845 ATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 1787 Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975 |||| || |||||||| || |||| ||| | ||||| | ||| || || || ||||| | Sbjct 1786 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 1727 Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035 |||| | || | || | | ||| || | || ||||| | | |||| Sbjct 1726 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 1667 Query 116036 AGTCGTAGTTGAGCT--TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093 |||| || | || | ||| || | |||| | ||||||||| |||| ||||||||| Sbjct 1666 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 1609 Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 116151 || || ||||| ||||| ||||||||||| || || ||| | ||||| || Sbjct 1608 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATAGATAATTCAACACTT 1551 Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 116211 ||||| | || || ||||| || || |||||||| || ||||| | |||| || || Sbjct 1550 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 1491 Query 116212 TCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 116271 |||||||| | | | ||| || || |||| || | |||||||||||| | Sbjct 1490 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 1431 Query 116272 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 116331 ||||||| | | ||||||||| || | | || || || || ||||| | || ||| Sbjct 1430 GCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTA 1371 Query 116332 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 ||||| | |||| | ||||| || ||||||||||| |||||||| | ||| || Sbjct 1370 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTC 1315 >seq4829 Length=1098 Score = 100 bits (110), Expect = 3e-16 Identities = 325/493 (66%), Gaps = 19/493 (4%) Strand=Plus/Minus Query 127553 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 127612 || || || || ||||| || ||||||||| | ||| | ||| ||||||||||| || Sbjct 797 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 738 Query 127613 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCTCG 127672 | |||||| ||||||||||| || || || ||| || || || | | | ||| Sbjct 737 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 678 Query 127673 GCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGAT 127731 ||||| | | |||| | | ||| ||| || | ||||| | ||||||| || ||| Sbjct 677 GCAAA-CAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGAT 619 Query 127732 ACATGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 127788 |||||||| || | || || || | |||| ||| |||| || |||||||||||| Sbjct 618 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 562 Query 127789 GTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTT-CATTATGGCACTGAT 127847 ||| |||| || | | ||||| ||||| || | ||| ||| || || Sbjct 561 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 503 Query 127848 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAAATTGTTATTGATAT 127907 || | |||||| | || || || || || ||| | ||||| | | | || Sbjct 502 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 443 Query 127908 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 127964 | ||| || || ||||| || ||||||| ||||| || | | | | | |||| Sbjct 442 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 383 Query 127965 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCT 128021 | |||||| ||||||| | ||||| || | | ||| || |||||||| | | Sbjct 382 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 326 Query 128022 CCTCCGCAGTCCA 128034 ||||||||||||| Sbjct 325 CCTCCGCAGTCCA 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613462812754080