Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5022 214 2e-50 seq4829 96.9 4e-15 >seq5022 Length=2556 Score = 214 bits (236), Expect = 2e-50 Identities = 688/1052 (65%), Gaps = 32/1052 (3%) Strand=Plus/Plus Query 112297 CTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 112356 ||||||| || ||||||||||| | ||| | || || || || |||||| | || || Sbjct 1103 CTCAAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATCTA 1162 Query 112357 ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTA 112416 ||||| | ||||||||||| ||||| |||||| | || ||||| | |||| | Sbjct 1163 ATCAACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATATT 1222 Query 112417 CAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 112476 || || || || || || ||||| | || | || | || | ||| | Sbjct 1223 CATCACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGTTG 1282 Query 112477 ATCCAGA-GACAAAGACATTTGAT-----TATGAAAAACTCCACGAAGTTACGAAAACTG 112530 | || ||||| || ||| | | ||| || | || ||| |||| || || Sbjct 1283 AAAGTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAAGGTTG 1342 Query 112531 TCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTA 112590 | || |||||| | || | | | || |||||||| | || || ||||| ||||| | | Sbjct 1343 TGACTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGCAAGGA 1402 Query 112591 AATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCA 112650 ||| ||||||||| || | ||||||| | | |||||||||||| | || |||| |||| Sbjct 1403 GATCAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGCCTTCA 1462 Query 112651 TTCT-TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTT 112709 | | ||| || |||||||||| ||||| |||||| | ||| | || ||| Sbjct 1463 TGATGTTGAGATTAC-CATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAATTTTT 1521 Query 112710 GAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGC--AGAGGTTGATGGTC 112767 || || || ||||| || ||| | ||||| ||| || || | ||| ||||| | Sbjct 1522 GAAACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCTATTAGG--GATGGAC 1579 Query 112768 CATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG 112827 ||||||| || ||||| || ||||| || || ||||| | || || |||||| | |||| Sbjct 1580 CATATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTTTGGG 1639 Query 112828 --AAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAA 112885 ||| | | | | ||| || |||||||| | | ||||| ||||||| || Sbjct 1640 GTAAGAAGCCAACCAACTT--ATATGACTGGGATTCATTAAAGGAGAAAATCAAGGCCAA 1697 Query 112886 GGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATC 112943 || || | | | || || | | ||||||||||| || || || || | ||||| Sbjct 1698 TGG--TTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTCAAATT 1755 Query 112944 TTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCT 113002 | ||| | || |||||||||||||| ||||| | || || || ||| |||||| | Sbjct 1756 CTAGGTTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCT-AGAAGAGTTTT 1814 Query 113003 CGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCT 113062 || || || || |||||||||| || | || || | || || || || Sbjct 1815 AGCCGGTGAATTCCAGATTGTCAACCCTTATATGTTGAGAGATTTAGTTGAAATGGGACT 1874 Query 113063 CTGGTCCAAGGA---TATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATAT 113119 |||| || || |||||| | | || | || |||||| ||||| || | Sbjct 1875 CTGG---AATGATTCTATGAAAAACCATATCATCTCAGATAATGGTTCGATTCAGAACTT 1931 Query 113120 TGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAA 113179 | ||||||| | || || ||| | || || || || ||||| ||| | || Sbjct 1932 ACCGAATATTCCTCAAGAGATCAAGGACTTATATAAGACTGTCTGGGAGATCTCGCAAAA 1991 Query 113180 GGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA- 113238 | | || || ||||| || ||| | ||| | | | ||||| ||| ||||| Sbjct 1992 GACAATTATCGATATGGCTGCTGATAGAGGTGCATACGTGGATCAGTCACAATCTATGAA 2051 Query 113239 -ATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGG 113297 ||| ||| || ||| |||||| ||| || | | || ||||| | || ||||| Sbjct 2052 CATCCATT--TGAAAAATCCAACAATGGGTAAATTAACGTCCATGCATTTCTATGGTTGG 2109 Query 113298 AAGAAGGGTCTCAAAACGGGGATGTATTACCT 113329 |||||||| ||||| || || ||||||||||| Sbjct 2110 AAGAAGGGGCTCAAGACAGGTATGTATTACCT 2141 Score = 140 bits (154), Expect = 4e-28 Identities = 240/343 (70%), Gaps = 4/343 (1%) Strand=Plus/Plus Query 111642 GGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGTCCC-GTGG 111700 ||||| ||||| || ||||||||||||||| | || || || | |||||| | || Sbjct 529 GGTATTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGG 588 Query 111701 TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTC 111760 ||| |||| || || | ||||| || ||||| | ||||| |||||| |||||||| Sbjct 589 TAT-TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTC 647 Query 111761 CAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCAC 111820 |||||| | |||||| ||||| ||||| || | || || || | ||| | | Sbjct 648 TTCATGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAA 707 Query 111821 TGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAG 111880 |||||||| || || || ||||||||||| ||| | || || ||| || | || Sbjct 708 AGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAG 767 Query 111881 AGCCAACAAG-TCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGC 111939 | |||| | ||| |||| ||||| |||||| ||| |||| |||||||||||| Sbjct 768 A-TCAACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGA 826 Query 111940 TTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG 111982 || | || ||||| ||| || | ||||| |||||| ||| Sbjct 827 TTAGGGTCTTTAATAACACTGCAAGGTATGTTGACCAAGGTGG 869 >seq4829 Length=1098 Score = 96.9 bits (106), Expect = 4e-15 Identities = 323/491 (66%), Gaps = 15/491 (3%) Strand=Plus/Plus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTA---AAT 101873 |||||||| || || | |||||||| || |||||| | |||||||| | | | || Sbjct 313 TGGACTGCGGAGGAAATTGATCTCTCCAAAGATTTGCATGATTGGAACAATAGATTGAAC 372 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 |||||||||| ||||| | | || || |||||||||| || ||||| || Sbjct 373 GAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGTATA 432 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCT 101993 || ||| ||| | | | || || | ||| || ||| | || || | || | Sbjct 433 GTCAATGAAAATTTAGTTGAGAATTTCTCAAGTGATGTTCAAATTCCAGAGGCTAAATGT 492 Query 101994 TTCTATGCGTATCAATGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCAT 102052 ||||||| || ||| | || ||| ||| | ||| ||| || || | | | || Sbjct 493 TTCTATGGGTTCCAAATT-ATGATGGAAAACATTCATTCGGAAACTTATTCTTTATTGAT 551 Query 102053 AGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTT--TGAA-GCCATCCAAAC 102109 || | || || || ||| | || | | | |||| | || || || |||| Sbjct 552 TGATACTTACATCAAAGATC---CAAAGGAAAGTGAATTCTTATTCAATGCAATTGAAAC 608 Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTG-ATACAAAGTCGC 102168 | | |||||||| | | || || || |||||| | || ||| ||| | | |||| || Sbjct 609 AATCCCATGTATCAAGGAAAAGGCCGAATGGGCTTTAAAATGGATTGCAGATAAAGATGC 668 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 || ||||| ||| | | | |||||||| |||||| ||||| ||||||||||||| Sbjct 669 ATTG-TTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTT 727 Query 102229 CCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 | || ||| | || | ||| | || ||| ||||| | ||||||||| | |||||| Sbjct 728 CATT-TGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCC 786 Query 102288 AACGAGCTTAT 102298 |||||||| || Sbjct 787 AACGAGCTGAT 797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620697489287360