Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5022 104 3e-17 >seq5022 Length=2556 Score = 104 bits (114), Expect = 3e-17 Identities = 665/1055 (63%), Gaps = 34/1055 (3%) Strand=Plus/Minus Query 109410 AAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAG 109469 ||| ||||||||||| || ||||| || |||||| | || | |||||| || | | Sbjct 2142 AAGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAA 2083 Query 109470 TTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCG 109529 ||| | ||| ||| | | || | | |||||| || || |||||||| | | || Sbjct 2082 TTTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGC 2023 Query 109530 ACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTA 109589 ||| | |||||| ||||| ||||| || |||||| || |||||||||||||| || Sbjct 2022 ACCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATA 1963 Query 109590 CAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCAC 109649 || | |||||| || | ||||| | | | ||| ||||| || ||| | | | Sbjct 1962 TAAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGAT 1903 Query 109650 CATGAGATCCTTCAT---CTCTTTCGACCAGAGACCGACCTTTTTGAGATC-GTCAACAA 109705 || | | ||||| || || |||||| || | | | ||| ||||| | Sbjct 1902 GATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-A 1847 Query 109706 GATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCG 109765 || |||||| | |||||||| || | | || ||| || || | | Sbjct 1846 TATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAG 1787 Query 109766 TGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGG 109825 |||| ||||| || || || |||| ||||| ||||| | || ||||| || ||||| | Sbjct 1786 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 1727 Query 109826 GAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCC 109885 | || | || | |||| | ||| || | ||| | ||| | || |||| Sbjct 1726 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 1667 Query 109886 AATCATAACGACCACTAAATT--TAGTCTCACCATCCCACATATCTGGTTGAAGTACACC 109943 | ||||| ||| || | | || | |||| | ||| || || | ||| Sbjct 1666 AGTCATA--------TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACC 1615 Query 109944 CTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCT--CGGCCAACTCG 110001 | | |||||||| || | ||| |||| || | || || ||| | || || Sbjct 1614 TTGGGATGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATAGATAATTCA 1557 Query 110002 GATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGA 110061 ||||| | || |||||||| || || |||||||| ||| ||||| Sbjct 1556 ACACTTGCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTT 1497 Query 110062 GACTCTTCACAGTCGAAGGGAAGACCACAA-AGAATAAACACATCCGCTAGACCCTGAAC 110120 | ||| | || || || | | | ||| | || || |||| || | ||| || || Sbjct 1496 GCTTCTGGCGAATCAAATGGTA-ATCTCAACATCATGAAGGCATCTGCCAAACCTTGGAC 1438 Query 110121 ACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAA 110180 ||| | | |||| || | | |||| || || | | |||||||| || || || | Sbjct 1437 ACCAACAGCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTA 1378 Query 110181 GTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT 110240 ||| | ||||||| ||| | || || |||||| ||| || |||||||| | || Sbjct 1377 GTTTCTATCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTT 1318 Query 110241 GTC---GTAAT-CGAAC-GTTTTCGTC-TCCTTATTGACATATTTGGGGAGAGCAATAGA 110294 || || || | ||| ||| | ||| || | | ||| || || | |||| | Sbjct 1317 CTCAAAGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACT 1258 Query 110295 CGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTG--TATTCCAAAATTTCCGTACAC 110352 || | ||| || || | || || || | | || ||||| | |||||| || Sbjct 1257 AGCTAAATTACAAACTGCTGTTTC--CTCAGGTGATGAATATTCAACAATTTCACAGCAT 1200 Query 110353 AAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCC 110412 || |||||| || || |||||||| || | ||||| ||||| ||| ||||||||| Sbjct 1199 AAATTGGAAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCC 1140 Query 110413 TTATAGAGCATGTATGGGGTACCAGTTTCCGTCTG 110447 ||||| | |||| | || ||||||||||| || || Sbjct 1139 TTATATAACATGAAAGGTGTACCAGTTTCAGTTTG 1105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588933387586400