Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq5022 104 3e-17
>seq5022
Length=2556
Score = 104 bits (114), Expect = 3e-17
Identities = 665/1055 (63%), Gaps = 34/1055 (3%)
Strand=Plus/Minus
Query 109410 AAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAG 109469
||| ||||||||||| || ||||| || |||||| | || | |||||| || | |
Sbjct 2142 AAGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAA 2083
Query 109470 TTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCG 109529
||| | ||| ||| | | || | | |||||| || || |||||||| | | ||
Sbjct 2082 TTTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGC 2023
Query 109530 ACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTA 109589
||| | |||||| ||||| ||||| || |||||| || |||||||||||||| ||
Sbjct 2022 ACCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATA 1963
Query 109590 CAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCAC 109649
|| | |||||| || | ||||| | | | ||| ||||| || ||| | | |
Sbjct 1962 TAAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGAT 1903
Query 109650 CATGAGATCCTTCAT---CTCTTTCGACCAGAGACCGACCTTTTTGAGATC-GTCAACAA 109705
|| | | ||||| || || |||||| || | | | ||| ||||| |
Sbjct 1902 GATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-A 1847
Query 109706 GATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCG 109765
|| |||||| | |||||||| || | | || ||| || || | |
Sbjct 1846 TATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAG 1787
Query 109766 TGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGG 109825
|||| ||||| || || || |||| ||||| ||||| | || ||||| || ||||| |
Sbjct 1786 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 1727
Query 109826 GAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCC 109885
| || | || | |||| | ||| || | ||| | ||| | || ||||
Sbjct 1726 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 1667
Query 109886 AATCATAACGACCACTAAATT--TAGTCTCACCATCCCACATATCTGGTTGAAGTACACC 109943
| ||||| ||| || | | || | |||| | ||| || || | |||
Sbjct 1666 AGTCATA--------TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACC 1615
Query 109944 CTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCT--CGGCCAACTCG 110001
| | |||||||| || | ||| |||| || | || || ||| | || ||
Sbjct 1614 TTGGGATGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATAGATAATTCA 1557
Query 110002 GATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGA 110061
||||| | || |||||||| || || |||||||| ||| |||||
Sbjct 1556 ACACTTGCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTT 1497
Query 110062 GACTCTTCACAGTCGAAGGGAAGACCACAA-AGAATAAACACATCCGCTAGACCCTGAAC 110120
| ||| | || || || | | | ||| | || || |||| || | ||| || ||
Sbjct 1496 GCTTCTGGCGAATCAAATGGTA-ATCTCAACATCATGAAGGCATCTGCCAAACCTTGGAC 1438
Query 110121 ACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAA 110180
||| | | |||| || | | |||| || || | | |||||||| || || || |
Sbjct 1437 ACCAACAGCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTA 1378
Query 110181 GTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT 110240
||| | ||||||| ||| | || || |||||| ||| || |||||||| | ||
Sbjct 1377 GTTTCTATCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTT 1318
Query 110241 GTC---GTAAT-CGAAC-GTTTTCGTC-TCCTTATTGACATATTTGGGGAGAGCAATAGA 110294
|| || || | ||| ||| | ||| || | | ||| || || | |||| |
Sbjct 1317 CTCAAAGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACT 1258
Query 110295 CGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTG--TATTCCAAAATTTCCGTACAC 110352
|| | ||| || || | || || || | | || ||||| | |||||| ||
Sbjct 1257 AGCTAAATTACAAACTGCTGTTTC--CTCAGGTGATGAATATTCAACAATTTCACAGCAT 1200
Query 110353 AAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCC 110412
|| |||||| || || |||||||| || | ||||| ||||| ||| |||||||||
Sbjct 1199 AAATTGGAAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCC 1140
Query 110413 TTATAGAGCATGTATGGGGTACCAGTTTCCGTCTG 110447
||||| | |||| | || ||||||||||| || ||
Sbjct 1139 TTATATAACATGAAAGGTGTACCAGTTTCAGTTTG 1105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588933387586400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |