Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5022 187 3e-42 >seq5022 Length=2556 Score = 187 bits (206), Expect = 3e-42 Identities = 495/744 (67%), Gaps = 24/744 (3%) Strand=Plus/Minus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGG 105953 |||||||||| || || || || | |||||| ||| || || || | ||||| | Sbjct 1839 GTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAGTGTAAG 1781 Query 105954 GTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCA 106013 ||||||||||||| || | ||| | ||||| | || || || || ||||||||||| | Sbjct 1780 GTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAA 1721 Query 106014 TCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTC 106071 | || || | | | || || || ||||||| ||||| | ||||||||| Sbjct 1720 CAAGCAATGAATTTCTCAAA--CCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTC 1663 Query 106072 GTAGTTGAGCTTGGTTT-CACCTT--CCCACATATCAAATTGAAGCACCCCTTGGGACGT 106128 || | || |||||| | ||| |||| | |||||| || || | |||||||| | Sbjct 1662 ATA--TAAG-TTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGC 1606 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 ||||| || ||||| |||||||| | || | || |||||| || ||||| Sbjct 1605 AGGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTC 1546 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 || | || ||||| ||||||||||| || || ||||| ||||| ||||| || Sbjct 1545 CAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGA 1486 Query 106249 ATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAAT 106308 |||||||| | | ||| || || |||| || | |||||| ||||| | | |||| Sbjct 1485 ATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAAT 1426 Query 106309 AGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAAT 106368 ||||||| || |||||| || | | ||||| ||||| ||||| | ||||| || || Sbjct 1425 TGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTATCGAT 1366 Query 106369 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA-----A 106423 || | || | ||||| || |||| |||||| |||||||| | || ||| | | Sbjct 1365 GATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATA 1306 Query 106424 TCAAAAGTGCGAGTC-TC---TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 106479 ||| ||| | ||| || |||| ||| | || | || | || ||||| Sbjct 1305 CCAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCTAAATT 1249 Query 106480 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACT 106539 ||||| || || || || || || || | |||||| || || |||||| Sbjct 1248 ACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGA 1189 Query 106540 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCAT 106599 || || |||||||| | ||| ||| || ||||| || |||||||| || | ||| Sbjct 1188 TTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACAT 1129 Query 106600 GTAGGGCGTCCCCGTCTCCGTCTG 106623 | | || || || || || || || Sbjct 1128 GAAAGGTGTACCAGTTTCAGTTTG 1105 Score = 120 bits (132), Expect = 4e-22 Identities = 291/438 (66%), Gaps = 2/438 (0%) Strand=Plus/Minus Query 106940 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 106999 ||| |||| | ||||| | || ||| ||||| || | || |||||||||||| ||| Sbjct 869 CCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCA 810 Query 107000 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 107059 | ||| |||||| || || |||| ||| | | | ||| | || ||| || || Sbjct 809 TTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGT 750 Query 107060 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 107119 | ||||||||| ||||| || || || ||||| || | | ||| |||||||| Sbjct 749 AACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATA 690 Query 107120 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 107179 || | || || || ||||| | || | | ||| || ||||| || |||||| Sbjct 689 CCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGA 630 Query 107180 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTC 107238 ||||| | |||||| || ||||| | || || |||| |||||| | |||||| | Sbjct 629 GTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAA-ATACCTCTTTGACATCAAATT 571 Query 107239 GTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAA 107298 || || || | ||||||||||| || || || || || || | ||| || | ||| | Sbjct 570 ATAAGTTTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTAT 511 Query 107299 CATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAG 107358 | | |||||| |||| | | |||| | | | |||||| ||| | || | Sbjct 510 TAAATGTTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAA 451 Query 107359 GGTTTTGAGACCAAAGTA 107376 ||||||| |||||| || Sbjct 450 TGTTTTGAAACCAAAATA 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589938114889120