Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3814 125 8e-24 >seq3814 Length=3066 Score = 125 bits (138), Expect = 8e-24 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGT 154931 |||||| |||| || || || || ||||| | |||||| | | || | | | ||| Sbjct 2083 ATTATGGTTACTTATCCTTCAACTTATGGTCTGTTTGAACCAACTATAAAAGAAGCTTGT 2142 Query 154932 AAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAG 154991 |||| |||| | ||||||||||||| || || ||||| || ||| | || || || Sbjct 2143 GAGATTATTCACCAACATGGTGGTCAGGTTTACCTCGATGGTGCTAATATGAACGCTCAA 2202 Query 154992 GTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAA 155051 || || ||| || ||| |||| | ||||| || || |||||| | || ||||||||| Sbjct 2203 GTTGGTCTAACATCTCCAGGTGATTTAGGTGCTGACGTTTGTCATTTGAATTTACATAAA 2262 Query 155052 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCA 155108 || || ||||| ||||| ||||| ||||| || |||||||| || |||| ||| Sbjct 2263 ACTTTTGCCATTCCTCATGGTGGTGGTGGTCCAGGTGTAGGTCCAATTTGTGTTGCA 2319 Score = 111 bits (122), Expect = 2e-19 Identities = 183/263 (70%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 153202 GTCTTATA--GGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGT 153259 |||||||| ||| |||| || ||||| || | ||| | ||| || || |||| | Sbjct 363 GTCTTATATTGGTAAAGGTTATTATGGTACAAAATTACCACTAGTTATTCAAAGAAATCT 422 Query 153260 TCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGG 153319 | ||||||||| ||||| || || || || || ||||||||||| | ||||| || Sbjct 423 ATTGGAGAATCCTGCATGGTATACTTCCTATACACCTTATCAAGCTGAAGTTTCTCAAGG 482 Query 153320 AAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAAT 153379 |||||||| | || | ||||| ||||| | | | || || || || || ||||| Sbjct 483 TAGATTGGAGAGTCTACTTAATTATCAAACAGTTGTATCGGATCTGACTGGCTTGCCAAT 542 Query 153380 AGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATTAGCATA 153439 || || || ||| ||||||| |||| | | | || |||||||| ||| | || ||| Sbjct 543 CGCCAATGCTTCTTTATTAGACGAAGGATCGTCGGCTGCAGAAGCGATGATTTTGTCATT 602 Query 153440 TAATTCTACAAGAGATAAGAAGA 153462 ||| | |||||| || |||| Sbjct 603 TAACAATTCAAGAGGCAAAAAGA 625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579170893953920