Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1075 311 7e-79 seq2673 300 1e-75 seq3021 217 1e-50 seq1289 194 1e-43 seq4228 156 3e-32 seq2623 150 1e-30 seq5022 118 9e-21 seq2706 118 9e-21 seq2598 118 9e-21 seq730 107 2e-17 seq3095 98.7 8e-15 >seq1075 Length=1668 Score = 311 bits (344), Expect = 7e-79 Identities = 567/815 (70%), Gaps = 30/815 (4%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTA--TCATGGTGTGTTG 551847 || ||| |||| | ||||| |||||||||||||| ||| | || |||| | || Sbjct 400 GGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGATTAGTTACTCAT--TTTGCAA 457 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCT-ATCTACATCTGCCAA-AGCTCTTCGTCG 551905 | || || || ||||| | || ||| | | || || | | || |||| | | | Sbjct 458 ATGAATTCAAGAGAAAATATAAGAAGGATTTGACCTCCAAC--CAAAGAGCTTTAAGAAG 515 Query 551906 TCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCT---TTCATCTGGTACTCAAACCAC 551962 ||||||||||||| |||||||| || || || | |||||||| ||||||| | Sbjct 516 ATTAAGAACTGCTTGTGAAAGAGCAAAGAGAACTTTATCTTCATCTG---CTCAAACTTC 572 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCT--ATTTCGAGGGCC 552020 |||||| | || || ||||||| || || |||| ||| ||| || | || || Sbjct 573 AATTGAAATTGACTCTCTATTTGAAGGTATCGATTTC--TACTCCTCAATCACTAGAGCT 630 Query 552021 AAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTT 552080 | ||||||||| | || ||||| | |||||| || | || ||||| ||| | ||| Sbjct 631 AGATTTGAAGAATTATGCGCTGATTTGTTTAGATCCACTTTGGACCCAGTTGAAAAGGTT 690 Query 552081 TTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCT 552140 |||| ||| |||| |||||||||| | | |||||||| | ||||| || || Sbjct 691 TTAAAGGATGCAAAACTTGATAAATCTGCGATTGAAGAAATTGTTTTAGTTGGAGGTTCA 750 Query 552141 ACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCT---TATTTCAATGGTAAAAAATTA 552197 ||||||||||| || ||| ||| ||| |||| |||||||||||||| | | Sbjct 751 ACAAGAATTCCAAAGGTTC---AAAAATTAGTTTCTGACTATTTCAATGGTAAGGATCCA 807 Query 552198 AATGAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTA 552255 ||| |||| | || |||||||| |||||||| |||||||| || ||||||| |||| Sbjct 808 AAT--AAGTCCATCAACCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCTA 865 Query 552256 TTCTTTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCT 552314 || | |||| | || | | ||| ||| ||| || | || | | ||||||||||| Sbjct 866 TTTTGACTGGTGATACATCCTCAAAGACT-CAAGATTTATTATTGTTGGATGTTACTCCA 924 Query 552315 CTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACT 552374 |||| | ||| | ||||| | ||| ||| | ||||| || | || |||||| || Sbjct 925 TTATCCTTGGGTATTGAAACTGCTGGTGGTGTCATGACCAAGTTGATTCCTAGAAACTCT 984 Query 552375 ACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTT 552434 || || || ||||| |||||| | || || || ||| ||||||||||| ||| |||| Sbjct 985 ACCATCCCATGTAAGAAATCTGAGATCTTCTCCACTTATGCAGATAATCAACCTGGTGTT 1044 Query 552435 ACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACT 552494 ||||||| ||| |||||| ||| | | || || || || || ||||||| Sbjct 1045 TTAATTCAAGTTTATGAAGGTGAACGTGCAAAGACCAAGGACAACAACTTGCTTGGTAAG 1104 Query 552495 TTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTC 552554 ||| | ||| |||||||| || ||||| | || || || ||||||||||| || || Sbjct 1105 TTTGAGTTATCTGGTATTCCACCAGCTCCAAGAGGTGTTCCACAAATTGAAGTCACCTTT 1164 Query 552555 GATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 ||||| ||||| ||||| || |||||||| |||| Sbjct 1165 GATATTGATGCTAATGGTATCTTGAATGTCTCTGC 1199 Score = 140 bits (154), Expect = 3e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375 ||| | |||||| |||| |||||||||||||||| || ||||| |||| || ||| Sbjct 64 TTTACTCCAGAAGAAATATCATCTATGGTTTTAACAAAGATGAAGGAAACCGCTGAAGCT 123 Query 550376 TTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCA 550435 | | ||| || |||| |||||| || | || || || ||||| || |||||||| Sbjct 124 TACTTGGGTAAAACCGTTAAGGATGCTGTTGTTACAGTTCCTGCATACTTCAATGACTCT 183 Query 550436 CAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATC 550495 ||| | ||||| || ||||||||||| |||||| || | ||||| | | ||||| Sbjct 184 CAAAGACAAGCAACCAAAGATGCTGGTACTATTGCAGGCTTGAATGTCTTGAGAATTATT 243 Query 550496 AATGAACCTACTGCTGCTGCACTTGCATATGG 550527 || ||||| |||||||||||| |||| ||||| Sbjct 244 AACGAACCAACTGCTGCTGCAATTGCTTATGG 275 >seq2673 Length=1572 Score = 300 bits (332), Expect = 1e-75 Identities = 489/694 (70%), Gaps = 24/694 (3%) Strand=Plus/Plus Query 551908 TAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTG 551967 ||||||||||||| |||||||| || || || | || ||| | ||||||| | |||| Sbjct 428 TAAGAACTGCTTGTGAAAGAGCAAAGAGAACTTTATCTTCTTCTGCTCAAACTTCAATTG 487 Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTG 552027 || | ||||| |||||||| || ||||||||| | || |||| | || || | ||||| Sbjct 488 AAATTGATTCCTTATTTGAAGGTATTGATTATTACACTTCTATAACTAGAGCAAGATTTG 547 Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAG 552087 |||| | ||| ||| | || ||| || | || ||||| ||| |||| || | | Sbjct 548 AAGAATTATGTCAAGATTTATTCAGATCTACTTTAGACCCAGTTGAAAAAGTCTTGAAGG 607 Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 || | || | || || |||| || | |||||||| | |||||||| ||||| |||| Sbjct 608 ATGCTAAATTGGACAAGTCCAGTGTTGACGAAATTGTTTTAGTTGGTGGTTCTACTAGAA 667 Query 552148 TTCCTAAAATTCGCGAAATGTTAAGTTC---TTATTTCAATGGTAAAAAATTAAATGAAA 552204 |||| || ||| ||| |||| ||| || ||||||||||| || |||| || Sbjct 668 TTCCAAAGGTTC---AAAAGTTAGTTTCCGACTACTTCAATGGTAAGGAACCAAAT--AA 722 Query 552205 GT--GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 || | || |||||||| |||||||| |||||||| || ||||||| ||||| | | Sbjct 723 GTCCATCAACCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCTATCTTGAC 782 Query 552263 TG--GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCT 552320 || ||| || | | || ||| ||| || | || | | |||||||| || ||||| Sbjct 783 TGGTGACCAA-TCCTCTAAGACT-CAAGATTTATTATTATTGGATGTTACCCCATTATCT 840 Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380 | ||| | ||||| | ||| ||| | ||||| || | || ||||| | || ||| Sbjct 841 TTAGGTATTGAAACTGCTGGTGGTGTCATGACCAAGTTGATTCCAAGAAACTCCACCATT 900 Query 552381 CCTTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAAT 552439 |||||||| ||||| || ||| || || ||| ||||||| ||| | | |||| || Sbjct 901 CCTTGTAAGAAATC-CGAAACTTTCTCCACTTATGCAGATAACCAACCAGGTGTTTTGAT 959 Query 552440 TCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTT 552495 |||| | |||||||| |||||| ||||| ||||| |||||| |||| | Sbjct 960 TCAAGTCTTTGAAGGTGAAAGAGCTAGAACTAAGGATAA----CAACTTGTTGGGTAAGT 1015 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || | ||| |||||||| || || || | || || || |||||||||||||| || | Sbjct 1016 TTGAATTATCTGGTATTCCACCAGCCCCAAGAGGTGTTCCTCAAATTGAAGTTACCTTTG 1075 Query 552556 ATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 |||| ||||| ||||| || ||||||| |||| Sbjct 1076 ATATTGATGCTAATGGTATCCTGAATGTTTCTGC 1109 Score = 114 bits (126), Expect = 1e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 550340 ATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGAT 550399 ||||||||| || ||||| ||| || |||| | ||||| | |||| ||| Sbjct 1 ATGGTTTTAGGTAAGATGAAGGAAATTGCTGAAGCTTATCTTGGTTGTAAGGTTAACGAT 60 Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || | ||||| ||||| || || ||||| || ||| | |||||||| || ||||| Sbjct 61 GCTGTTGTTACTGTTCCAGCTTACTTCAATGATTCTCAAAGACAAGCTACCAAGGATGCA 120 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || |||||||| | || ||| | | |||||||||||||| |||||||||||| || Sbjct 121 GGTGCAATTGCTGGCTTAAACGTTTTAAGAATTATCAATGAACCAACTGCTGCTGCAATT 180 Query 550520 GCATATGGACTTGATAAACATAATGA 550545 || ||||| | ||||| | ||||| Sbjct 181 GCTTATGGTTTAGATAAGAAGAATGA 206 >seq3021 Length=3222 Score = 217 bits (240), Expect = 1e-50 Identities = 417/603 (69%), Gaps = 20/603 (3%) Strand=Plus/Plus Query 368545 GGAACAAAACATTTTGATAATTGGCTCCAAAATTCAGTTGATTGGTGTATTTCAAGAAGT 368604 |||| |||| ||| | ||||||| | ||||| || |||||| | | || |||| Sbjct 1329 GGAA-AAAAGATTCTC-TAATTGGATTGAAAATGCAAGAGATTGGAATGTCTCTAGAAAC 1386 Query 368605 AGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGT 368664 || | |||||| |||||||| ||| ||||| |||||||||| ||||||| |||||||| Sbjct 1387 AGATATTGGGGTACTCCAATCCCATTATGGGTATCTGATGATTTTGAAGAAGTTGTTTGT 1446 Query 368665 ATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACAT 368724 |||| || ||| |||||||| |||||||||||| | | | ||||| |||| | ||| Sbjct 1447 GTAGGCTCCATTCAAGAATTGAGAGAATTATCTGGCGATGATAGTATTACTGATATCCAT 1506 Query 368725 ATTGATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTATTGTCTCGA 368784 | ||||| ||||| ||||| | |||||||| ||||| || || || |||| || Sbjct 1507 AGAGATAAGATTGACCACATCACTATTCCATCCAAGAAGGGCAAGGGCCAATTGAAGAGA 1566 Query 368785 GTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACAT 368844 |||| | || || || || ||||||||||| ||||| |||||||| | | | ||| Sbjct 1567 ATTGAGGATGTCTTTGACTGTTGGTTTGAATCTGGTTCAATGCCTTACGCTTCGAAGCAT 1626 Query 368845 TATCCATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTA 368904 ||||| ||||| |||||| | | |||| |||| ||| ||| ||| || | Sbjct 1627 TATCCTTTTGAAAACGCAGATCAATTTGCAAATG-----CATTCCCTGG-TGACTTCATT 1680 Query 368905 ACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATT--ATCCACAG 368962 | ||| | |||||||| | |||||||| ||||| ||| || || | |||| Sbjct 1681 TCTGAAGGTTTAGATCAAACTAGAGGTTGGTTCTATACTTTATCTGTTTTGGGTACACA- 1739 Query 368963 CTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTG 369022 || | || | || ||| || || || || || ||||| | || || || Sbjct 1740 CT-TGTTTGGTAGGGTACCTTACAAGAACGTCATTGTTTCTGGTTTAATTTTAGCCGGTG 1798 Query 369023 ATGGTCAAAAGATGTCAAAAAG--TAAGGGTAATTATTCCGATCCTAATATTTTAATTGA 369080 ||||| | |||||||| || || ||| | || ||| | ||||| || | | | | Sbjct 1799 ATGGTAAGAAGATGTCCAAGAGATTAAAG--AACTATCCAGATCCAAACTTAATTACTTC 1856 Query 369081 TAAATTTGGTGCTGATACTTTGAGATTATACCTATTGTCA--TCACCTGTAGTAAAAGCA 369138 ||||| |||||| ||| ||||||| || || | | ||| || ||||| ||| |||| Sbjct 1857 TAAATATGGTGCAGATGCTTTGAGGTTGTA--TTTGATCAACTCCCCTGTCTTAAGAGCA 1914 Query 369139 GAA 369141 ||| Sbjct 1915 GAA 1917 >seq1289 Length=1848 Score = 194 bits (214), Expect = 1e-43 Identities = 373/545 (68%), Gaps = 15/545 (3%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTT--GGCAAAA----T 550045 || || ||||| |||||||| || || || ||||||| |||| | ||| | | Sbjct 25 GCAATTGGTATTGATTTAGGTACTACTTACTCATGTGTTGCAGTTTACGACAACACTACT 84 Query 550046 GGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCT 550105 ||| |||||||||||||| || || |||||||||||| ||| ||||||| ||| || Sbjct 85 GGT---GTTGAAATTATTGCTAACGAACAAGGTAACAGAGTTACCCCATCTTTCGTTGCT 141 Query 550106 TTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCT 550165 || || | ||| ||| |||||||||||||||| ||||||| || || || Sbjct 142 TTTACCCCAGAAGAAAGATTAATTGGTGATGCAGCAAAGAATCAAGCTGCTTTGAACCCA 201 Query 550166 ACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTT 550225 ||||| ||| |||| ||||| || | |||||||| ||| ||| |||| | ||| Sbjct 202 ACCAACACTGTTTTCGATGCAAAGAGATTAATTGGTAGAGCTTTCTCTGATGAATCCGTT 261 Query 550226 CAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATT 550285 || ||||| ||| ||||||||| | |||| ||| || || || | ||| Sbjct 262 CAAAAGGATATCAAGACCTGGCCTTTCAAGGTTGTCGATGACAACGGTAACCCAAAGATT 321 Query 550286 GAAGCTACTCATGAAGGATCTGTTA--AACAATTT-TCACCAGAACAAATTTCATCTATG 550342 |||| | || | || || | || | ||| || ||| || ||||||| || ||| Sbjct 322 GAAGTTTCTTACTTGGG---TGAAACTAAGACTTTCTCTCCACAAGAAATTTCTTCCATG 378 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402 ||||||| |||||||| ||| || || | ||||||| ||| | || Sbjct 379 GTTTTAACCAAAATGAAGGAAATTGCAGAAGCAAAGTTAGGTCAAGCTGTTGACAAGGCT 438 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 || | ||||| ||||| ||||| ||||| ||||| | ||||| ||||| ||||| || Sbjct 439 GTTGTTACTGTTCCAGCTTATTTCAATGATGCACAAAGACAAGCAACTAAGGATGCAGGT 498 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522 |||||| || | | ||||| | ||||| || ||||| ||||| || || |||| Sbjct 499 TCTATTGCAGGTTTAGACGTTCTAAGAATTATTAACGAACCAACTGCAGCAGCTATTGCT 558 Query 550523 TATGG 550527 ||||| Sbjct 559 TATGG 563 >seq4228 Length=2049 Score = 156 bits (172), Expect = 3e-32 Identities = 338/503 (67%), Gaps = 16/503 (3%) Strand=Plus/Plus Query 551964 ATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTT-CGAGGGCCAA 552022 |||||| | |||||||| |||| || ||||||| | | | ||| | |||||||| Sbjct 943 ATTGAAATCGATTCATTTGTTGATGGTATTGATT-TCTCAGAACAATTGACTAGGGCCAA 1001 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||| ||||| || | || | || | ||| || | ||||||| |||||||||| Sbjct 1002 ATTCGAAGAACTTAATATAGAATTATTCAAAAAGACTTTGAAACCAGTCCAACAAGTTTT 1061 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | ||| | ||| || | | || | |||| ||||| ||||||||||| ||||| Sbjct 1062 AGATGATGCCAAGGTTAAGGCAAGTGAAATTGATGATATTGTTCTTGTTGGTGGTTCTAC 1121 Query 552143 AAGAATTCCTAAAATTCGCGAAATGTT----AAGTTCTTATTTCAATGGTAAAAAATTAA 552198 |||||||||||| | | || | || || ||| ||||||||||| || | Sbjct 1122 CAGAATTCCTAAAGTCCAAGAGTTATTGGAAAAATTC----TTCAATGGTAAGAAGATCT 1177 Query 552199 ATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258 | || | ||||| ||||| ||||||||||||||||| || ||||||||| | | Sbjct 1178 CCAAGGGTATCAATCCTGATGAAGCTGTTGCCTATGGTGCTGCCGTTCAAGCAGGTGTCT 1237 Query 552259 TTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318 | ||||| ||| ||| | || |||| || | | ||||| | |||| || Sbjct 1238 TATCTGG------TGAAGAAGGTGTCGAAGATATCGTTTTGATTGATGTCAATCCTTTAA 1291 Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378 || | ||| | ||||| ||| ||| ||||||||| | ||| | ||||||||| | | Sbjct 1292 CTTTAGGTATTGAAACCACTGGTGGTGTTATGACTACCTTGATCAAGAGAAATACTCCAA 1351 Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438 |||| || ||||||| | || ||||| ||||| || | ||| ||| | Sbjct 1352 TTCCAACAAAGAAATCTCAAATTTTCTCTACTGCCGTTGATAACCAGAATGCCGTTCTGA 1411 Query 552439 TTCAAATTTTTGAAGGAGAAAGA 552461 | ||||| | |||||| |||||| Sbjct 1412 TCCAAATCTATGAAGGTGAAAGA 1434 Score = 138 bits (152), Expect = 9e-27 Identities = 367/547 (67%), Gaps = 13/547 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||||| || || || ||| ||||||||||| | | ||||| ||||| Sbjct 121 GGTATTGATTTGGGTACTACGTATTCATGTGTTGGTGTGATGAAGAATGGACGTGTTGAG 180 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA-AAC 550116 ||| | || |||||||| |||||||||| ||| ||||| |||||| | || ||||| ||| Sbjct 181 ATTCTGGCGAATGATCAGGGTAACAGAATTACGCCATCGTATGTTGCCTTTACGGAGAAC 240 Query 550117 T--GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 || || ||||| ||||| ||||| | || || | |||||| ||||| Sbjct 241 AACGAGAGATTGGTTGGAGATGCGGCAAAGAACCAGGCTGCATCGAATCCTCATAATACC 300 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGA-AGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 || ||||| || | ||||||| || ||||| | || | | || ||| Sbjct 301 ATCTTTGACATCAAGAGACTAATTGGCCAGCGGTTTTCA-GACAAGGTGATCCAAAGAGA 359 Query 550234 TATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT-- 550291 || ||||||| ||||| | ||||| || || | ||| | || ||| | Sbjct 360 AATTAAGCATTTGCCTTATAAGATTGTCGATCAAGATGACAGGCCTGTTGTT-AAGGTGG 418 Query 550292 ACTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTTAAT 550350 | | || | || | | ||| | |||| || | ||| ||||||| | ||| ||||| Sbjct 419 AAT-ATAATGG-TGAGGAAAAGACATTTACAGCTGAAGAAATTTCTGCAATGATTTTAGG 476 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTT-ACGGATGCAGTAATAA 550409 || |||||| | || | || ||||| |||||| | || |||| || | | Sbjct 477 TAAGATGAAATCCATTGCTGAAGATTACCTTGGT-AAGAAGGTCACTCATGCTGTTGTTA 535 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 |||| ||||| ||||| ||||| | ||| | ||||||||||| ||||| || ||||| Sbjct 536 CTGTTCCAGCTTATTTCAATGATGCGCAAAGACAAGCTACTAAGGATGCCGGTACTATTG 595 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || | | |||| | | ||| |||||||||| ||||| || || |||| |||||| Sbjct 596 CGGGCTTGACTGTTTTAAGAATTGTCAATGAACCAACTGCAGCGGCTATTGCCTATGGAT 655 Query 550530 TTGATAA 550536 | ||||| Sbjct 656 TAGATAA 662 >seq2623 Length=1908 Score = 150 bits (166), Expect = 1e-30 Identities = 329/487 (68%), Gaps = 23/487 (5%) Strand=Plus/Plus Query 552116 TGAAATTGTGCTTGTTGGTGG-ATCTACAAGAATTCCTAAAATTCGCGAAA-TGTTAAGT 552173 |||| || | || |||||||| || | ||||||| || ||| || |||| ||||||| Sbjct 1038 TGAAGTTATTCTGGTTGGTGGTATGT-CAAGAATGCCAAAAGTTATTGAAACTGTTAAGG 1096 Query 552174 TCTTATTTCAATGGTAAAAAA--TTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | |||| |||||| || || | || ||| ||||||||||| |||||||| Sbjct 1097 AGAT-TTTC---GGTAAAGAACCTTCCA--AAGCTGTCAATCCAGATGAAGCTGTTGCTA 1150 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291 |||||| |||||||||| || || | || || || | | || | Sbjct 1151 TTGGTGCAGCAATTCAAGGTGCAGTTTTATCAGGTGAAGTTAAGGA------------TG 1198 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 || || | | |||||||| || ||||| | ||| | ||||| | || ||| || | | Sbjct 1199 TTTTATTATTGGATGTTACACCATTATCTTTAGGTATTGAAACTTTAGGTGGTGTTTTCA 1258 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGT 552411 | | | || |||||||| |||||||| || ||||| | || || || || Sbjct 1259 CAAGATTGATTCCAAGAAATACAACTATTCCAACAAAGAAATCCCAAGTTTTCTCAACTG 1318 Query 552412 ATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTA 552471 | ||||| |||||| ||||| |||| | | ||| |||| |||||| |||| || Sbjct 1319 CTGCAGATGGTCAAACATCTGTTGAAATTAGAGTCTTTCAAGGTGAAAGAGAATTAGTTA 1378 Query 552472 AAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAG 552531 ||||||||| |||||| ||| | | | ||||||||| || ||||| || | Sbjct 1379 GAGATAATAAATTGATTGGTAATTTCACACTTGCAGGTATTCCACCAGCTCCAAAGGGTG 1438 Query 552532 TACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTT 552591 | || |||||||||||||| || ||||| ||||| |||| ||| | ||||| ||||| Sbjct 1439 TTCCACAAATTGAAGTTACCTTTGATATTGATGCAGATGGTATTATCAATGTTTCTGCTA 1498 Query 552592 GTGATAA 552598 ||||| Sbjct 1499 AAGATAA 1505 >seq5022 Length=2556 Score = 118 bits (130), Expect = 9e-21 Identities = 329/498 (66%), Gaps = 19/498 (4%) Strand=Plus/Minus Query 685307 AATATCTGCATGCCAAGGTTCAATATAAATAGCAAATGAACCAGCTCTTTTG---CCTCC 685363 |||||||| ||||||||| |||||||| | ||||| | ||||| |||||| || || Sbjct 924 AATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACC 865 Query 685364 TTGATTGGCATACCTCGATATATTATTAAATACAGTTAATACTCGTAGA---CCACTTGC 685420 ||| | ||||||| | | |||||||| || | | | | | | | ||| | | Sbjct 864 TTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGA 805 Query 685421 TGTGCCTTGTGTAGAATTAATATAAGATCCATCCGCCCTAATATTTGAAACATTTACACC 685480 ||| || | ||| ||||||||| ||| | |||||||| | || || || Sbjct 804 TGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCC 745 Query 685481 AATTCCACCAGCATATTTACTAATCATAGCACAATCTTTCCAACAATCACCAATTGCTCC 685540 ||| ||||||||| ||| ||||| |||||| |||||| || |||| || || | Sbjct 744 AATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTC 685 Query 685541 CAT---ATCATCTTTTATTCCTAAAAGGAAACAGCTTGATAATTG--TTCATGAGTAGTT 685595 || ||| || || ||| | | | |||||| || | ||| ||| || ||| Sbjct 684 AATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGG--AGTA 627 Query 685596 CCAGCATTAAATAATGTTGGTGTTGCATGAGTAAAATAACCCTGTGACAACATTTCATAA 685655 || | ||| || | ||||| | ||||| || ||||| | || ||||| || | |||| Sbjct 626 CCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAA 567 Query 685656 GTTTCAAATATTCTGTTTAGATCATTATTACGATAATGTATAGCAATTGCTACACGCATA 685715 ||||| |||| | | |||| ||| | | ||| ||| ||| || || | ||| Sbjct 566 GTTTC-AATA-ACAG----AATCAATATCATCACCATGAATACCAACGGCAACTCTCATT 513 Query 685716 AATAAATGTTGAGGTCTTTCTATGATTATTCCTTTAACtttttttAGATAACTTTGTTCA 685775 | ||||||||| || ||||| || | || || | | || |||||||| ||| Sbjct 512 ATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCT 453 Query 685776 AGAGTTCTAAAACCAAAA 685793 | ||| | ||||||||| Sbjct 452 AATGTTTTGAAACCAAAA 435 >seq2706 Length=450 Score = 118 bits (130), Expect = 9e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 563272 TGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGT 563331 ||||| ||| ||| || ||| ||||| |||| | |||||| |||||| | ||| Sbjct 203 TGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGC 144 Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| ||||||||||| || ||||| ||||| ||||| || ||||| ||||| Sbjct 143 TTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTA 84 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGT 563450 || || || || || |||| ||| | | ||| | |||| ||| |||||||| Sbjct 83 GACTTGACATTGTCGATAGTGTCAG-ATGACTCGACTTCTAAGGTAATAGTCTTACCAGT 25 Query 563451 AAGAGTTTTAACGAAAATTTGCAT 563474 | ||||||||| ||||||||||| Sbjct 24 TAAAGTTTTAACAAAAATTTGCAT 1 >seq2598 Length=450 Score = 118 bits (130), Expect = 9e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 563272 TGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGT 563331 ||||| ||| ||| || ||| ||||| |||| | |||||| |||||| | ||| Sbjct 203 TGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGC 144 Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| ||||||||||| || ||||| ||||| ||||| || ||||| ||||| Sbjct 143 TTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTA 84 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGT 563450 || || || || || |||| ||| | | ||| | |||| ||| |||||||| Sbjct 83 GACTTGACATTGTCGATAGTGTCAG-ATGACTCGACTTCTAAGGTAATAGTCTTACCAGT 25 Query 563451 AAGAGTTTTAACGAAAATTTGCAT 563474 | ||||||||| ||||||||||| Sbjct 24 TAAAGTTTTAACAAAAATTTGCAT 1 >seq730 Length=387 Score = 107 bits (118), Expect = 2e-17 Identities = 154/211 (73%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| ||||||||| ||| ||||| || ||||| || | || |||||| |||||| Sbjct 207 CAAG-TGAAGGGTAGATTCCTTTTGG--ATGTTGTAGTCGGATAAAGTTCTACCATCTTC 151 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | ||| || || ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 150 TAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTG 91 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTT 563443 || ||||| || || || || || |||| || | | ||| | |||| || | Sbjct 90 GATCTTTTGCTTGACATTGTCGATGGTGTCAG-AAGATTCAACTTCTAAGGTAATGGTCT 32 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| || | || || || ||||||||||| Sbjct 31 TACCGGTTAAGGTCTTGACAAAAATTTGCAT 1 >seq3095 Length=4272 Score = 98.7 bits (108), Expect = 8e-15 Identities = 226/338 (67%), Gaps = 3/338 (1%) Strand=Plus/Minus Query 428255 GTAAAGATATATCTTGCGCTTGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGT 428314 ||||| ||||||||||| ||| | ||||||||| || | | ||||| ||||| Sbjct 2504 GTAAAAATATATCTTGCTGCTGCTGCATCTTTACCACCAGCCGCTCTAGAACCAAAACCA 2445 Query 428315 CCATTAGGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACA 428374 |||| || | ||||||||||||||||||| || ||| ||| || || | | || | Sbjct 2444 CCATGTGGAACCAATAAATTAATATTATTAGAACCAACAAAATCCTGTGCTAAACCAATA 2385 Query 428375 ATGGTACTAGTTAAGGATTGTTCACCATGATGATATTTAGTTCTTTTTGAAACTGCACCT 428434 || | ||| |||| ||||| ||||| ||| ||| || | || |||| Sbjct 2384 ATCGATTGCATTAGGGATGCATCACCGTGATGGTATCCAGTATGTTCGGCAATGTAACCT 2325 Query 428435 TGTAATTCTGATACCTTTATTTCTTCTTTATAAATACCTTCTTCTACTGATCCATAAAAT 428494 | ||||| || || || ||||| || | | ||| | || || || |||| | Sbjct 2324 TCTAATTGCGAGACTTTAATTTCGTCCCTCAAGTTACGT--TTATA-GCATGCATAGAGA 2268 Query 428495 ACTTTGCGTTGTGATGGTTTGAATCCATCCATAATATTAGGTATAGATCTTAAATTATCA 428554 | || | ||| ||| ||||| |||||||||| | || || ||||| | |||||| Sbjct 2267 ATCTTTCTTTGAACTGGCTTGAACCCATCCATAACAGAAGCAATGGATCTGACGTTATCA 2208 Query 428555 TCCACTGAGAATGATATTAGTTCTTGATGAATGAAATC 428592 ||| ||||| |||| ||||| || |||||| || Sbjct 2207 GCCATAGAGAAGAGGATTAATTCTTTATTAATGAATTC 2170 Score = 93.3 bits (102), Expect = 3e-13 Identities = 241/357 (68%), Gaps = 13/357 (4%) Strand=Plus/Minus Query 429310 CTTAAGTGGAAATACGCCATAATAATCTCGACCAATAACATTTAGTCCAGACATTGCAAA 429369 || ||| ||||| | |||||||| | || |||| |||| || || | || || Sbjct 1562 CTCAAGGGGAAACAT-CCATAATAGTTTCTGCCAACAACAGCAAGGCCTTGAACCGCCAA 1504 Query 429370 AGTTTTAGCTGAATCTCCTTCCGTCAAAATAAGTGTACATTTATATCCTTCTTTGGTACC 429429 || || || || || ||||| ||||| || | ||||||||||| |||||| | ||||| Sbjct 1503 AGACTTTGCAGAGTCACCTTCGGTCAAGATCAAAGTACATTTATAACCTTCTCTAGTACC 1444 Query 429430 AGCTTTGTGAGCATTATATAATTTTTCATATCTAATA--GCTCCTCTACCTT-TGCCATC 429486 |||||||| |||| | ||||||| || | | || || |||| | || ||| || Sbjct 1443 AGCTTTGTTTGCATCCTCTAATTTTGGGTAACCAGTAATTCTGCTCTTCTTTGCGCCGTC 1384 Query 429487 TGTTTTACTAA--GACTTGCTTCTGCTTTAGCTTGAGC-ATTTGCAATAATTTGTGACAC 429543 |||||| | | | ||| || || ||||| ||| | || | ||| | || | | | Sbjct 1383 TGTTTTCTTGAGGGCCTT--ATCAGCATTAGCCTGAACGATATCCAACACTTCATCA-AT 1327 Query 429544 TACACCAGTTTTAATAACTTTTTTAATAAAAATATC-AGTAACTGTAA--AATTACTTCC 429600 || ||| || || | || |||||||||||| | || | || | || |||| || Sbjct 1326 TATACCGGTATTTAAAATTTTTTTAATAAATTTCTCTGGCAATTCCAATCGTTTACCACC 1267 Query 429601 AAAATTAGCTGGTTTAGTAGTGAGATATTCTTTTGTTTGTGTATCAAAATCTGGATT 429657 ||| || | || | ||||| |||||||| ||||| || | | || ||||||| Sbjct 1266 AAACTTTGAAGGCTGTGTAGTTAGATATTCCTTTGTCTGAGAAGTGAACGCTGGATT 1210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028989904456120