Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq730 145 6e-30
seq2706 140 3e-28
seq2598 140 3e-28
>seq730
Length=387
Score = 145 bits (160), Expect = 6e-30
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| || || ||||| ||||| ||||||||| ||| ||| ||||
Sbjct 1 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 60
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | || |||||||||| ||| || || || || | || || |||
Sbjct 61 GACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAA 120
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| |||||||||||||| || || ||||| |||||| || |||| | |||| || |||
Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAAC 180
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
|| ||||| |||||||| || ||| |||| || ||||| |||| || || ||
Sbjct 181 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTATCAT 233
>seq2706
Length=450
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| ||||| ||||| ||||| || |||||| ||| || | ||
Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | || ||||| |||||| ||||| || || | || || |||
Sbjct 61 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 120
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| |||||||||||||| || || ||||| |||||| || |||| || | || || |||
Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 180
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|||||||| ||||||||||| ||| | || || |||||| |||| ||
Sbjct 181 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 227
>seq2598
Length=450
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| ||||| ||||| ||||| || |||||| ||| || | ||
Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | || ||||| |||||| ||||| || || | || || |||
Sbjct 61 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 120
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| |||||||||||||| || || ||||| |||||| || |||| || | || || |||
Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 180
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|||||||| ||||||||||| ||| | || || |||||| |||| ||
Sbjct 181 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425374791413652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |