Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq730 145 6e-30 seq2706 140 3e-28 seq2598 140 3e-28 >seq730 Length=387 Score = 145 bits (160), Expect = 6e-30 Identities = 172/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || ||||| ||||| ||||||||| ||| ||| |||| Sbjct 1 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 60 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || |||||||||| ||| || || || || | || || ||| Sbjct 61 GACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAA 120 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || |||||||||||||| || || ||||| |||||| || |||| | |||| || ||| Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAAC 180 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 || ||||| |||||||| || ||| |||| || ||||| |||| || || || Sbjct 181 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTATCAT 233 >seq2706 Length=450 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| ||||| ||||| || |||||| ||| || | || Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || ||||| |||||| ||||| || || | || || ||| Sbjct 61 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 120 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || |||||||||||||| || || ||||| |||||| || |||| || | || || ||| Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 180 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||||||| ||||||||||| ||| | || || |||||| |||| || Sbjct 181 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 227 >seq2598 Length=450 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| ||||| ||||| || |||||| ||| || | || Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || ||||| |||||| ||||| || || | || || ||| Sbjct 61 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 120 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || |||||||||||||| || || ||||| |||||| || |||| || | || || ||| Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 180 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||||||| ||||||||||| ||| | || || |||||| |||| || Sbjct 181 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425374791413652