Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq5463 170 1e-37
seq5022 118 5e-22
>seq5463
Length=2400
Score = 170 bits (188), Expect = 1e-37
Identities = 192/252 (76%), Gaps = 4/252 (2%)
Strand=Plus/Minus
Query 25898 AATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATT 25957
|||||| |||||| ||| | || ||||||||||| || | |||||||||||| |
Sbjct 1070 AATAAACACCAATCTTCATCTCTTTCCACTTTCTCCATGAACATATCTGGAATCCATAGA 1011
Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017
||| |||||||||||| |||||||||||||| || || |||||||| | | || | ||
Sbjct 1010 GCAATAAATAAATCTCTAGCTCTCATTTCTTCCTTCCCATGATTCTTCCTGATAT-TGAG 952
Query 26018 AAA-TCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-CTACCTTTTCTTT 26075
||| ||||||| ||| |||||||| |||||||| || |||||| |||| |||||
Sbjct 951 AAAGTCAAAAACATCACCATGCCATGGCTCTAAATATAT-GCAAAATGCACCTGGTCTTT 893
Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135
| |||||| || || || ||| ||||||| |||||| ||||| ||||| || | ||
Sbjct 892 TGTTTCCACCCTGGTCAACATATTGTGCAGTTGAATTGAATACTTTTAACATAGGGATTA 833
Query 26136 ATCCAGTTGAAA 26147
| || | |||||
Sbjct 832 AACCGGATGAAA 821
>seq5022
Length=2556
Score = 118 bits (130), Expect = 5e-22
Identities = 281/418 (67%), Gaps = 14/418 (3%)
Strand=Plus/Minus
Query 25995 CGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGA 26054
|||| || || | | ||| | ||||||| ||||||||| ||||| || || | ||| |
Sbjct 955 CGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATA 896
Query 26055 TAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGA 26114
||||| ||| |||||| |||||||| || || || |||||||| | ||| |
Sbjct 895 GTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAA 836
Query 26115 AAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGAT 26173
| || | | |||||||| |||||| ||| | | || || || | ||| | ||
Sbjct 835 AGACCCTAATCATTGGAA-TAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAA 777
Query 26174 CCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCT 26233
|| || |||||||||| || ||| | || || |||||||| ||| |||||
Sbjct 776 CCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAA 717
Query 26234 GCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAA 26293
||||| ||| | ||||| | || |||| ||| ||| | |||||| | | |||
Sbjct 716 GCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAG 657
Query 26294 AAACAAGAAGATAATTGCGAATGAGTTG---TTCCTGAATTAAATAATGTCGGTGTAGCA 26350
||||| ||||| | ||| || ||| | || ||||| || | || || | ||||
Sbjct 656 AAACATGAAGACATTTG---ATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCA 600
Query 26351 TGAGTATAATA--TCCTTCAC-TCAAAGCTGTATAAGTTTCAAGAACTTCATCGATAT 26405
|| || |||| || || || ||||| |||||||||||| ||| ||| ||||
Sbjct 599 TGTGTGAAATACCTCTTTGACATCAAAT---TATAAGTTTCAATAACAGAATCAATAT 545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253022150242100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |