Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5463 170 1e-37 seq5022 118 5e-22 >seq5463 Length=2400 Score = 170 bits (188), Expect = 1e-37 Identities = 192/252 (76%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 25898 AATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATT 25957 |||||| |||||| ||| | || ||||||||||| || | |||||||||||| | Sbjct 1070 AATAAACACCAATCTTCATCTCTTTCCACTTTCTCCATGAACATATCTGGAATCCATAGA 1011 Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017 ||| |||||||||||| |||||||||||||| || || |||||||| | | || | || Sbjct 1010 GCAATAAATAAATCTCTAGCTCTCATTTCTTCCTTCCCATGATTCTTCCTGATAT-TGAG 952 Query 26018 AAA-TCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-CTACCTTTTCTTT 26075 ||| ||||||| ||| |||||||| |||||||| || |||||| |||| ||||| Sbjct 951 AAAGTCAAAAACATCACCATGCCATGGCTCTAAATATAT-GCAAAATGCACCTGGTCTTT 893 Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135 | |||||| || || || ||| ||||||| |||||| ||||| ||||| || | || Sbjct 892 TGTTTCCACCCTGGTCAACATATTGTGCAGTTGAATTGAATACTTTTAACATAGGGATTA 833 Query 26136 ATCCAGTTGAAA 26147 | || | ||||| Sbjct 832 AACCGGATGAAA 821 >seq5022 Length=2556 Score = 118 bits (130), Expect = 5e-22 Identities = 281/418 (67%), Gaps = 14/418 (3%) Strand=Plus/Minus Query 25995 CGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGA 26054 |||| || || | | ||| | ||||||| ||||||||| ||||| || || | ||| | Sbjct 955 CGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATA 896 Query 26055 TAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGA 26114 ||||| ||| |||||| |||||||| || || || |||||||| | ||| | Sbjct 895 GTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAA 836 Query 26115 AAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGAT 26173 | || | | |||||||| |||||| ||| | | || || || | ||| | || Sbjct 835 AGACCCTAATCATTGGAA-TAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAA 777 Query 26174 CCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCT 26233 || || |||||||||| || ||| | || || |||||||| ||| ||||| Sbjct 776 CCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAA 717 Query 26234 GCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAA 26293 ||||| ||| | ||||| | || |||| ||| ||| | |||||| | | ||| Sbjct 716 GCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAG 657 Query 26294 AAACAAGAAGATAATTGCGAATGAGTTG---TTCCTGAATTAAATAATGTCGGTGTAGCA 26350 ||||| ||||| | ||| || ||| | || ||||| || | || || | |||| Sbjct 656 AAACATGAAGACATTTG---ATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCA 600 Query 26351 TGAGTATAATA--TCCTTCAC-TCAAAGCTGTATAAGTTTCAAGAACTTCATCGATAT 26405 || || |||| || || || ||||| |||||||||||| ||| ||| |||| Sbjct 599 TGTGTGAAATACCTCTTTGACATCAAAT---TATAAGTTTCAATAACAGAATCAATAT 545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253022150242100