Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5022 215 6e-51 seq2767 89.7 6e-13 >seq5022 Length=2556 Score = 215 bits (238), Expect = 6e-51 Identities = 499/743 (67%), Gaps = 22/743 (3%) Strand=Plus/Plus Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 || || || ||||| ||||| | ||| | || |||||||| ||||||||||| ||| Sbjct 1105 CAAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATCTAAT 1164 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018 ||| | |||||||| ||||| || ||| | ||| |||||| | || || || Sbjct 1165 CAACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATATTCA 1224 Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAAT 76078 || || || || ||||| ||||| || | || | || | ||| | Sbjct 1225 TCACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGT---T 1281 Query 76079 GAA---GA-GACTCGCACTTTTGAT-----TATGAAAAACTTCATGAAATCACAAAGATT 76129 ||| || ||| | ||| ||| | | ||| || | |||||||| |||||| || Sbjct 1282 GAAAGTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAAGGTT 1341 Query 76130 GTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGA 76189 || || ||||| | || | |||| || ||||| | ||||| ||||| ||||| | Sbjct 1342 GTGACTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGCAAGG 1401 Query 76190 AAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTT 76249 | || |||||| || ||||||| |||| | | ||||| |||||| | || |||| || Sbjct 1402 AGATCAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGCCTTC 1461 Query 76250 ATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTT 76309 || ||| | | |||||||||| ||||| ||||| ||||| || || ||| Sbjct 1462 ATGATGTTGAGATTACCATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAATTTTT 1521 Query 76310 GAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCC 76369 |||||||| ||||| || | ||||||| ||| |||||| || | || | Sbjct 1522 GAAACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCTATTAGGGATGGACCA 1581 Query 76370 TATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGG-- 76427 |||||||| ||||| || ||||| || |||||||| | || ||||||||| | |||| Sbjct 1582 TATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTTTGGGGT 1641 Query 76428 AAGGTG-AAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAG 76486 ||| | |||||| || | || ||||||||| | ||||| ||||||| || Sbjct 1642 AAGAAGCCAACCAA-CTTA--TATGACTGGGATTCATTAAAGGAGAAAATCAAGGCCAAT 1698 Query 76487 GGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 76544 || || | | | || || | | ||||||||||| || || || || | ||||| Sbjct 1699 GG--TTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTCAAATTC 1756 Query 76545 TGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCG 76604 | ||| | || |||||||||||||| ||||| | || || ||| |||||| | | Sbjct 1757 TAGGTTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCTAGAAGAGTTTTAG 1816 Query 76605 CAGGTGAGTTTGTCATTGTCAAC 76627 | ||||| || ||||||||| Sbjct 1817 CCGGTGAATTCCAGATTGTCAAC 1839 Score = 107 bits (118), Expect = 2e-18 Identities = 228/338 (67%), Gaps = 2/338 (1%) Strand=Plus/Plus Query 75242 GGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGG 75300 || || || || || || ||||||||||| | || || || | |||||| | ||| Sbjct 529 GGTATTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGG 588 Query 75301 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTC 75360 ||| |||| || || | ||||| || |||||| | ||||| |||||| || ||||| Sbjct 589 TAT-TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTC 647 Query 75361 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 75420 || ||| | | || | ||||| || || || | |||||||||| ||| | | Sbjct 648 TTCATGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAA 707 Query 75421 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 75480 || ||||| || || || ||||| ||||||||| | || || ||| || | || Sbjct 708 AGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAG 767 Query 75481 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 75540 | | | | ||| |||| || || |||||| ||| |||| |||||||||||| | Sbjct 768 ATCAACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGAT 827 Query 75541 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 75578 | | || ||||| ||| || | ||||| | |||| Sbjct 828 TAGGGTCTTTAATAACACTGCAAGGTATGTTGACCAAG 865 >seq2767 Length=2694 Score = 89.7 bits (98), Expect = 6e-13 Identities = 271/414 (65%), Gaps = 5/414 (1%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || || |||||||| ||||| || || | ||| || ||||| || || || | Sbjct 1327 GGCGCAAAGATCCCTCGAGGTGCTATTTTAAATGGTCCACCCGGTACAGGTAAAACGTTA 1386 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 || || ||||| || |||||| || || || ||| | | || |||| | | Sbjct 1387 CTTGCTAAAGCCACTGCTGGTGAAGCAGGGGTTCCGTTCTACTCTGTT-TCTGGTTCTGA 1445 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 |||||||| |||||||||||||| ||||| | | ||||| || | || | | || Sbjct 1446 ATTTGTGGAAATGTTTGTTGGTGTTGGTGCGTCACGTGTTCGTGAGTTGTTCAAGACTGC 1505 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAA--GCA- 175511 | |||||| ||||| |||||| ||| ||||||| || ||||| | || || || Sbjct 1506 AAGAGAAAATGCACCATCTATTGTTTTCGTTGATGAAATCGATGCTATCGGAAAATCCAG 1565 Query 175512 ACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACT 175571 | | | | | |||||| || ||||| || |||||| | || | ||||| || || Sbjct 1566 AGGAAAGGGAAGAGGTATGGGAGGTAATGATGAAAGAGAAAACACCTTAAATCAGCTTCT 1625 Query 175572 CACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCG 175631 ||| |||||||| ||| | ||| | |||| ||| |||| | |||||||| Sbjct 1626 AGTCGAAATGGATGGATTTAAGTCTGACGATCATGTTGTTGTTTTTGCAGGTACTAATCG 1685 Query 175632 CGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCGCAAGAT 175685 || || | | || || | || | |||||| | |||||||| || || Sbjct 1686 TGTTGACGTTTTGGACCCAGCTTTGCTAAGACCGGGTAGATTTGATCGTAAAAT 1739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596526438189440