Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 277 3e-69
seq2706 150 3e-31
seq2598 150 3e-31
seq730 125 1e-23
>seq4829
Length=1098
Score = 277 bits (306), Expect = 3e-69
Identities = 523/761 (69%), Gaps = 22/761 (3%)
Strand=Plus/Minus
Query 17983 TAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTAG 18042
|| ||||||||| ||||| |||||||| || |||||||||| ||||||||| || |
Sbjct 1005 TAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAA 946
Query 18043 TCTGAAAGGTAGAGCATCAATAATAAAT-TCTTTCTCTATCTCAACAGACTCTTTTATTA 18101
||| |||||| || ||| | | || ||||| || || ||||| | || | || |
Sbjct 945 GTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTT-TCAATATCAACGGCTTCGGTAATGA 887
Query 18102 TGTTTATTACCCTAGATT----TTGGCAATTTATTAATTATGTGATTATAATATAATAAA 18157
| | | | || | || | || || | || |||||| | | | |||
Sbjct 886 TTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAA--ATGTGA-----AAAGAGCAAA 834
Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217
|| |||||||| || ||||||||||||||||| | || | ||||| ||||| ||
Sbjct 833 CAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAA 774
Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277
|| ||||| | |||||| ||||| | ||| || || ||||| || || ||| |||||
Sbjct 773 CCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAA 714
Query 18278 ATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTGCT-C 18334
||||| ||||| ||| || || || | || || || ||||| | || || | | || |
Sbjct 713 ATACCTTCAACAGCA-GCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGC 655
Query 18335 AGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCA 18394
| ||||||||| |||||||| | | ||||| || || | || || |||
Sbjct 654 A--ATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCA 597
Query 18395 TTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATAC 18454
|| || || || |||| || | |||||| || ||||| || || || ||||||||
Sbjct 596 TTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAA 537
Query 18455 ATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGA 18514
|||| ||||| ||| ||||||| || || || | ||| || || ||||||| |||
Sbjct 536 GTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGA 477
Query 18515 TATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGAT 18574
||||| || || | || | || || ||||| ||||| |||||||| |||| ||
Sbjct 476 ATTTGAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCA 417
Query 18575 GCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTTC 18631
|| || || || | ||| | |||||| | ||||||| || || | |||||||
Sbjct 416 GCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTC 357
Query 18632 CATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCC 18691
|| |||| | |||||| || ||||||| ||| |||| ||||| ||||||| ||| |||
Sbjct 356 CAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCC 297
Query 18692 TGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAA 18732
| |||||||||| |||| || | || | || |||||
Sbjct 296 TTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAA 256
>seq2706
Length=450
Score = 150 bits (166), Expect = 3e-31
Identities = 173/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| ||||||| || ||||| || |||||||| ||||||||||| |||
Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || || |||||| ||||| || ||||| || || || || |||
Sbjct 61 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 120
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| | || | ||| |||||||| | |||||| |||||||| || || || ||
Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 180
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || ||| || | || ||||| ||||| || ||||||||||| ||||
Sbjct 181 AT-TCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGGTG 229
>seq2598
Length=450
Score = 150 bits (166), Expect = 3e-31
Identities = 173/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| ||||||| || ||||| || |||||||| ||||||||||| |||
Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || || |||||| ||||| || ||||| || || || || |||
Sbjct 61 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 120
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| | || | ||| |||||||| | |||||| |||||||| || || || ||
Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 180
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || ||| || | || ||||| ||||| || ||||||||||| ||||
Sbjct 181 AT-TCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGGTG 229
>seq730
Length=387
Score = 125 bits (138), Expect = 1e-23
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || || || || || || ||||| |||||||| ||| ||||
Sbjct 1 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 60
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || || || | || || |||||||| ||||| || || || || |||
Sbjct 61 GACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAA 120
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| | || | ||| |||||||| | |||||| ||||||||||| || || |
Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACA-- 178
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || || || ||||| ||||| |||
Sbjct 179 ACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731819049060800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |