Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq2706 147 4e-30
seq2598 147 4e-30
seq4829 138 2e-27
seq730 132 9e-26
>seq2706
Length=450
Score = 147 bits (162), Expect = 4e-30
Identities = 174/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || ||||| || | ||||| || || ||| ||
Sbjct 236 TTCTTACCACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTG 177
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || || ||||| ||||| ||||| || | ||| ||||||
Sbjct 176 TAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGG 117
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| |||||| || ||||| ||||| || ||
Sbjct 116 TCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGAT 57
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||||| ||||| || ||||||||||| ||||||| || || |||||
Sbjct 56 GACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1
>seq2598
Length=450
Score = 147 bits (162), Expect = 4e-30
Identities = 174/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || ||||| || | ||||| || || ||| ||
Sbjct 236 TTCTTACCACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTG 177
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || || ||||| ||||| ||||| || | ||| ||||||
Sbjct 176 TAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGG 117
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| |||||| || ||||| ||||| || ||
Sbjct 116 TCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGAT 57
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||||| ||||| || ||||||||||| ||||||| || || |||||
Sbjct 56 GACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1
>seq4829
Length=1098
Score = 138 bits (152), Expect = 2e-27
Identities = 181/251 (72%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 39120 AGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAA 39179
|| ||||| |||||||| |||||||||||||| || ||| | || | || || ||
Sbjct 839 AGCAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAAC 780
Query 39180 GTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAA 39239
|| || |||||||| || ||||||||||| | ||| || || |||||||| || |||
Sbjct 779 GTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAG 720
Query 39240 AAGAATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCA 39299
||||| ||||| || ||| |||||||| | | || || |||||| | | | |
Sbjct 719 AAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTA 660
Query 39300 TCTAAAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATA 39359
||| |||||| |||| ||||| || || |||| |||||| | || || |||| ||
Sbjct 659 TCTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATT 600
Query 39360 GCTTTAAATAA 39370
|| || |||||
Sbjct 599 GCATTGAATAA 589
>seq730
Length=387
Score = 132 bits (146), Expect = 9e-26
Identities = 169/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || || || | |||| || || || || ||
Sbjct 233 ATGATACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAG 174
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| ||||||| || | || || ||||| ||||| ||||| || | ||| |||||||||
Sbjct 173 TCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCA 114
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| |||||||| || || | || ||||| || || || || |||
Sbjct 113 GGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGAT 54
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| ||||||| |||||||| ||||| ||||| || || | || || |||||
Sbjct 53 TCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905070513410400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |