Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5022 165 2e-35 seq3182 113 1e-19 seq2767 91.5 4e-13 >seq5022 Length=2556 Score = 165 bits (182), Expect = 2e-35 Identities = 214/296 (72%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 || ||||| || || ||||||| ||||| ||||| ||||| | | ||| |||||||| Sbjct 872 TTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATC 813 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 |||||||| || ||||| || ||| ||||| ||||||| ||| | || |||||| ||| Sbjct 812 CCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATA 753 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 |||| ||||||||||| | ||| ||||| ||| ||||| || | ||||| | Sbjct 752 TGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAG 693 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 ||||||||||| ||||| || | ||||| | || | || ||| | |||| || | Sbjct 692 ATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTT 633 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 || || || | ||||| || || || | ||||| | |||||| | || ||||| Sbjct 632 GGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACAT 577 >seq3182 Length=1803 Score = 113 bits (124), Expect = 1e-19 Identities = 327/502 (65%), Gaps = 10/502 (2%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||| | | |||| ||| || || ||||| | |||||| || || Sbjct 917 CTATCAAATCTACCTGGTCTCATTAAAGCTTTATCCAACATATCTGGTCTGTTGGTACCT 858 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 || | | |||| | || || |||| |||||||| ||||| ||| ||| Sbjct 857 GCTAGAATGACAACATGGTCAGTAGAGCTAAAGCCATCCATTTCAACTAAAAGTTGGTTA 798 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttt-- 289027 || || |||| |||| ||||| | |||| || || || | || || Sbjct 797 AGAGTAGCTTCCTTTTCGTCATTGG---CTCT-----CATTTGATTCTTTTCTCTTGCAC 746 Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 | |||| ||||| ||||| |||| || || | ||| |||| | | || || || Sbjct 745 TTCCAATTGCATCGATTTCATCAACAAATATAATACAAGGAGCCATCTTCCTAGCTGTTT 686 Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 ||| || || | ||||| || || |||| ||||||| ||||||| ||||| |||||| Sbjct 685 TAAACAAATCACGAACACGAGACGCACCAACACCAACAAACATTTCAACAAACTCAGAAC 626 Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 | || || | |||| ||| || || |||||| ||| |||| || | || | Sbjct 625 CAGAGACGGATAAAAATGGAACACCGGCCTCACCTGCTGTAGCCTTCGCTAGCAAAGTTT 566 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT 289267 |||| || ||||| || || || | | || |||| | ||||| || | || Sbjct 565 TACCGGTACCAGGAGGACCTGACAAGATGGCACCTCTTGGGATCTTTGCACCTAAACGCT 506 Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327 ||| || || |||||||||| |||| |||| | ||| | ||||| |||| Sbjct 505 CATACTTAGAGGGATTCTTTAAAAAGCTGACAAATTCCATGATTTCTTCCTTTGCTTCAT 446 Query 289328 CACATCCTGCTACATCAGCAAA 289349 |||| ||||| ||||||||||| Sbjct 445 CACAACCTGCAACATCAGCAAA 424 >seq2767 Length=2694 Score = 91.5 bits (100), Expect = 4e-13 Identities = 317/486 (65%), Gaps = 13/486 (3%) Strand=Plus/Minus Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTT 288933 || |||||||| || | || | | || || |||| || ||||||| | ||| Sbjct 1709 AAAGCTGGGTCCAAAACGTCAACACGATTAGTACCTGCAAAAACAACAACATGATCGTCA 1650 Query 288934 TGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993 ||||||||||||||| || || ||||| | || | ||| ||||||||||| Sbjct 1649 GACTTAAATCCATCCATTTCGACTAGAAGCTGATTTAAGGTGTTTTCTCTTTCATCATT- 1591 Query 288994 GAACCTCTTGAATCAC--CCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAA 289051 ||||| | | | || || ||| |||| || | |||||| ||||| |||| Sbjct 1590 --ACCTCCCATACCTCTTCCCTTTC-CTCTGGATTTT-CCGATAGCATCGATTTCATCAA 1535 Query 289052 TGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATG 289111 ||||| | | | || | ||||| ||| ||| | || || || | ||||| || | Sbjct 1534 CGAAAACAATAGATGGTGCATTTTCTCTTGCAGTCTTGAACAACTCACGAACACGTGACG 1475 Query 289112 CTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACA 289170 | |||| ||||||| ||||||| |||||||||||| | || || || | ||| | || Sbjct 1474 CACCAACACCAACAAACATTTCCACAAATTCAGAACCAGAAAC-AGAGTAGAACGGAACC 1416 Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230 |||||| || || || | || || | || |||||||| || ||||| || | | Sbjct 1415 CCTGCTTCACCAGCAGTGGCTTTAGCAAGTAACGTTTTACCTGTACCGGGTGGACCATTT 1356 Query 289231 AATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT--ATATTTCTCAGGGCTCTTTA 289288 || | | | || || | ||||| || | ||| ||| || | || | |||| Sbjct 1355 AAAATAGCACCTCGAGGGATCTTTGCGCC--TAATCTTTCATACTTTTGGGGATTTTTTA 1298 Query 289289 AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAA 289348 | || |||| ||| || || | ||||| |||| ||| || || |||||| || Sbjct 1297 AGAAACTAACAAACTCCATAATCTCTTCCTTTGCTTCATTACAACCAGCAACATCATTAA 1238 Query 289349 AAGTAA 289354 | |||| Sbjct 1237 ATGTAA 1232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471708451846556