Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq5022 165 2e-35
seq3182 113 1e-19
seq2767 91.5 4e-13
>seq5022
Length=2556
Score = 165 bits (182), Expect = 2e-35
Identities = 214/296 (72%), Gaps = 0/296 (0%)
Strand=Plus/Minus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| ||||| || || ||||||| ||||| ||||| ||||| | | ||| ||||||||
Sbjct 872 TTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATC 813
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
|||||||| || ||||| || ||| ||||| ||||||| ||| | || |||||| |||
Sbjct 812 CCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATA 753
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
|||| ||||||||||| | ||| ||||| ||| ||||| || | ||||| |
Sbjct 752 TGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAG 693
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
||||||||||| ||||| || | ||||| | || | || ||| | |||| || |
Sbjct 692 ATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTT 633
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|| || || | ||||| || || || | ||||| | |||||| | || |||||
Sbjct 632 GGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACAT 577
>seq3182
Length=1803
Score = 113 bits (124), Expect = 1e-19
Identities = 327/502 (65%), Gaps = 10/502 (2%)
Strand=Plus/Minus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|||||||| ||||| | | |||| ||| || || ||||| | |||||| || ||
Sbjct 917 CTATCAAATCTACCTGGTCTCATTAAAGCTTTATCCAACATATCTGGTCTGTTGGTACCT 858
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969
|| | | |||| | || || |||| |||||||| ||||| ||| |||
Sbjct 857 GCTAGAATGACAACATGGTCAGTAGAGCTAAAGCCATCCATTTCAACTAAAAGTTGGTTA 798
Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttt-- 289027
|| || |||| |||| ||||| | |||| || || || | || ||
Sbjct 797 AGAGTAGCTTCCTTTTCGTCATTGG---CTCT-----CATTTGATTCTTTTCTCTTGCAC 746
Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087
| |||| ||||| ||||| |||| || || | ||| |||| | | || || ||
Sbjct 745 TTCCAATTGCATCGATTTCATCAACAAATATAATACAAGGAGCCATCTTCCTAGCTGTTT 686
Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147
||| || || | ||||| || || |||| ||||||| ||||||| ||||| ||||||
Sbjct 685 TAAACAAATCACGAACACGAGACGCACCAACACCAACAAACATTTCAACAAACTCAGAAC 626
Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207
| || || | |||| ||| || || |||||| ||| |||| || | || |
Sbjct 625 CAGAGACGGATAAAAATGGAACACCGGCCTCACCTGCTGTAGCCTTCGCTAGCAAAGTTT 566
Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT 289267
|||| || ||||| || || || | | || |||| | ||||| || | ||
Sbjct 565 TACCGGTACCAGGAGGACCTGACAAGATGGCACCTCTTGGGATCTTTGCACCTAAACGCT 506
Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327
||| || || |||||||||| |||| |||| | ||| | ||||| ||||
Sbjct 505 CATACTTAGAGGGATTCTTTAAAAAGCTGACAAATTCCATGATTTCTTCCTTTGCTTCAT 446
Query 289328 CACATCCTGCTACATCAGCAAA 289349
|||| ||||| |||||||||||
Sbjct 445 CACAACCTGCAACATCAGCAAA 424
>seq2767
Length=2694
Score = 91.5 bits (100), Expect = 4e-13
Identities = 317/486 (65%), Gaps = 13/486 (3%)
Strand=Plus/Minus
Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTT 288933
|| |||||||| || | || | | || || |||| || ||||||| | |||
Sbjct 1709 AAAGCTGGGTCCAAAACGTCAACACGATTAGTACCTGCAAAAACAACAACATGATCGTCA 1650
Query 288934 TGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993
||||||||||||||| || || ||||| | || | ||| |||||||||||
Sbjct 1649 GACTTAAATCCATCCATTTCGACTAGAAGCTGATTTAAGGTGTTTTCTCTTTCATCATT- 1591
Query 288994 GAACCTCTTGAATCAC--CCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAA 289051
||||| | | | || || ||| |||| || | |||||| ||||| ||||
Sbjct 1590 --ACCTCCCATACCTCTTCCCTTTC-CTCTGGATTTT-CCGATAGCATCGATTTCATCAA 1535
Query 289052 TGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATG 289111
||||| | | | || | ||||| ||| ||| | || || || | ||||| || |
Sbjct 1534 CGAAAACAATAGATGGTGCATTTTCTCTTGCAGTCTTGAACAACTCACGAACACGTGACG 1475
Query 289112 CTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACA 289170
| |||| ||||||| ||||||| |||||||||||| | || || || | ||| | ||
Sbjct 1474 CACCAACACCAACAAACATTTCCACAAATTCAGAACCAGAAAC-AGAGTAGAACGGAACC 1416
Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230
|||||| || || || | || || | || |||||||| || ||||| || | |
Sbjct 1415 CCTGCTTCACCAGCAGTGGCTTTAGCAAGTAACGTTTTACCTGTACCGGGTGGACCATTT 1356
Query 289231 AATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT--ATATTTCTCAGGGCTCTTTA 289288
|| | | | || || | ||||| || | ||| ||| || | || | ||||
Sbjct 1355 AAAATAGCACCTCGAGGGATCTTTGCGCC--TAATCTTTCATACTTTTGGGGATTTTTTA 1298
Query 289289 AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAA 289348
| || |||| ||| || || | ||||| |||| ||| || || |||||| ||
Sbjct 1297 AGAAACTAACAAACTCCATAATCTCTTCCTTTGCTTCATTACAACCAGCAACATCATTAA 1238
Query 289349 AAGTAA 289354
| ||||
Sbjct 1237 ATGTAA 1232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471708451846556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |