Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq3093 87.8 3e-12 >seq3093 Length=1836 Score = 87.8 bits (96), Expect = 3e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 142952 TATTCCTATTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGT 143011 ||||| ||||| | |||| ||||| |||| | ||||||| | | ||||| || Sbjct 1089 TATTCATATTTGGAAAGATGTTGATGAATGGAGTTCTTGGAATCTCAGGACAGATCCTGT 1148 Query 143012 CTTGCATATAGAACTTAGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAA 143071 ||||||||||| || || | |||||| ||| |||| |||| || || |||||||||| Sbjct 1149 GTTGCATATAGAGCTAAGAAAATGGGCAGATATTTTAATTATTGCCCCTCTAACGGCAAA 1208 Query 143072 TACGTTAGCAAAAATAGCCAACGGTATATGCGATAATTTACTAACATCTATAGTAAGAGC 143131 ||| || ||||| || || | || |||||||| |||| | | || ||||| Sbjct 1209 TACTTTGAGTAAAATTGCATTAGGGTTGTGTGATAATTTGTTAACTAATGTTGTTAGAGC 1268 Query 143132 CTGGGATA 143139 ||| ||| Sbjct 1269 GTGGAATA 1276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903345838199680