Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5022 181 3e-40
seq4829 131 4e-25
seq1125 87.8 4e-12
>seq5022
Length=2556
Score = 181 bits (200), Expect = 3e-40
Identities = 348/508 (69%), Gaps = 15/508 (3%)
Strand=Plus/Plus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
||||||||||||||||||| | ||| | |||| | | | | ||||| ||||
Sbjct 431 ACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTG 490
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
||| | || ||||| | | | | ||||| ||||||||||||| ||||||||
Sbjct 491 CCGAAAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTG 550
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT-----CATGCTAC 110476
| ||||||||||| |||| || | | || ||| || |||| |||||| |
Sbjct 551 ATTCTGTTATTGAAACTTATAATTTGAT--GTCAAAG---AGGTATTTCACACATGCTTC 605
Query 110477 TCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAG 110535
||| || || || || | || ||| || ||| || |||| || |||||| | |
Sbjct 606 TCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTCATG-TTTCTTAGTTG 664
Query 110536 GAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTT 110595
||| || || ||||| ||||||||||| |||||| || | |||||| |||| | ||||
Sbjct 665 CAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTT 724
Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655
| |||| |||| || ||||| | || | ||| ||||| | |||| || | |||
Sbjct 725 CCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATCAACTGGTTCTTATA 784
Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715
| || | || ||| | || | ||| || |||||||| | || ||||| || |||
Sbjct 785 TTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAGGGTCTTTAATAACA 844
Query 110716 CTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCG 110772
|||||| ||||| | |||||||| ||| ||| ||| | ||||| | ||| | |
Sbjct 845 CTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACCTGGTGCGTTTGCACTATATATTG 904
Query 110773 AACCTTGGCATTCAGATATATTTGAATT 110800
| ||||||||||||||||| |||| ||
Sbjct 905 AGCCTTGGCATTCAGATATTCTTGATTT 932
>seq4829
Length=1098
Score = 131 bits (144), Expect = 4e-25
Identities = 467/718 (65%), Gaps = 23/718 (3%)
Strand=Plus/Plus
Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTC 131491
|| |||||||| || ||||||| ||| | ||||| ||||| | | || | |||
Sbjct 253 CTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTC 312
Query 131492 TGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCTTG 131551
||||||| || || || ||| | |||||||| | |||||||| || ||| | |||
Sbjct 313 TGGACTGCGGAGGAAATTGATCTCTCCAAAGATTTGCATGATTGG-AACAATAGA--TTG 369
Query 131552 AATGAAAA----AGATTTTG--TTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGC 131605
|| ||||| ||||| | |||| | |||||| || ||||| || | ||||||
Sbjct 370 AACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGT 429
Query 131606 ATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAAT--TGATATTCCTGAAGTAA 131663
|| || | ||||||| | ||| |||||| ||||| || | | ||||| || | |
Sbjct 430 ATAGTCAATGAAAATTTAGTTGAGAATTTC--TCAAGTGATGTTCAAATTCCAGAGGCTA 487
Query 131664 CATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTAT 131723
|| ||||| || ||| | ||| |||||| || | ||||| ||||
Sbjct 488 AATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTATTCTTTAT 547
Query 131724 TGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATT---ATTTGATGCTGTAA 131780
||||||| | | | ||| || | | || || | |||| ||| |||| |
Sbjct 548 TGATTGATACTTACATCAAAGATCCAAAGGA---AAGTGAATTCTTATTCAATGCAATTG 604
Query 131781 ATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATT 131840
| | | | || || || | || || ||||||||| | ||||||||| |||| |
Sbjct 605 AAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCTTTAAAATGGATTGCAGATAAAG 664
Query 131841 CCGCTAATTTTTCTACA-AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCA 131899
|| | | ||| | | || | || || |||||| |||||||||||| ||||| ||
Sbjct 665 ATGC-ATTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCT 723
Query 131900 GGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTG 131959
||| | || | ||||| ||| | || ||| | || |||||||| || | | ||
Sbjct 724 GGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTC 783
Query 131960 TCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTAT 132019
||||| | | || | |||||||||| || ||||| || |||||| || ||| |
Sbjct 784 TCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTTT 843
Query 132020 AGAAAATTTGCTGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTT 132079
| | || ||| | || ||||| | | | | |||| | || | |||||| |||
Sbjct 844 TCACATTTGAACCATACCCCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTT 903
Query 132080 GATATCGAGAAGGAGTTTATT-ACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAAT 132136
||||| || || ||| | || || || || | ||| ||| ||| | || ||||||
Sbjct 904 GATATTGA-AAAGAGATACTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAAT 960
>seq1125
Length=5142
Score = 87.8 bits (96), Expect = 4e-12
Identities = 166/241 (69%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368
||||| | || |||||| ||| | |||||| | || || || | ||||| ||||||
Sbjct 1171 CATTTAATGGATAATGATCCGGTGTTATTCAATCGTCAGCCTTCTTTACATAAGATGTCT 1230
Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTG-ACATTTCGATTAAATGTAAGTG 305426
|||||| ||| | |||||||| ||| | ||| ||||| || | ||| || |
Sbjct 1231 ATGATGTGTCACAGGGTCAAAGT--TATGCCATATTCCACATTCAGAATGAATTTATCCG 1288
Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486
| | ||||| ||||| ||||| ||||| ||||||||||| ||||||| |||||||
Sbjct 1289 TTACATCACCTTACAATGCTGATTTCGATGGTGATGAAATGAACTTGCATGTTCCTCAAT 1348
Query 305487 CAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGTATCAAAACTTATCATTTCTC 305546
| | | || | ||||| |||| || | ||| | || | | ||||||||||
Sbjct 1349 CTTACGAAACCAGAGCTGAACTATCCGAGCTTTGTGCGGTTCCTTTGCAGATCATTTCTC 1408
Query 305547 C 305547
|
Sbjct 1409 C 1409
Score = 86.0 bits (94), Expect = 1e-11
Identities = 113/154 (73%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT-CA 304947
||||||||| |||| || | ||||||||||| |||||||| |||||| ||| ||
Sbjct 757 CAATATCATGTTGCTACTTATATGGATAATGATATTGCTGGTCAGCCGCAGGC-TCTACA 815
Query 304948 AAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTAT 305007
| ||| || ||||| | || |||||| || |||| ||||||||||||||| |
Sbjct 816 GAAATCAGGTAGACCGATCAAATCTATTAGAGCTCGTCTTAAGGGTAAAGAGGGTCGTTT 875
Query 305008 TCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041
||||||| | ||||| || | |||||||||
Sbjct 876 GAGAGGTAACTTGATGGGTAAGAGAGTTGATTTT 909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186724787446268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |