Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5022 271 1e-67 seq4829 253 3e-62 >seq5022 Length=2556 Score = 271 bits (300), Expect = 1e-67 Identities = 775/1171 (66%), Gaps = 43/1171 (4%) Strand=Plus/Minus Query 68410 AGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGT 68469 || || |||||||| || || || || |||| || ||||||||||| |||| | Sbjct 2141 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 2082 Query 68470 TTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCT 68529 || |||||| | ||| || ||||| ||||| ||||| | | | || Sbjct 2081 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 2022 Query 68530 CCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAA 68589 |||||||| || ||||| | ||||| ||||||| | || ||||| | ||||||| | Sbjct 2021 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 1962 Query 68590 ATCTGTTTGATATCATCTGGAAGGCTCG-TA--TTTTGAATGGATCCACCATCGGATATA 68646 | | ||||| || | |||| ||| || || ||||| || ||| ||| || || Sbjct 1961 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 1902 Query 68647 ATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGC 68706 || || || || ||||||||| | | | || |||| |||| | | || Sbjct 1901 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAA 1842 Query 68707 GGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATAT 68766 || || || || || ||||| || | ||| ||||| | || ||||||||| || || Sbjct 1841 GGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 1782 Query 68767 GGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCC 68826 ||||| | |||| || | || |||||||||| ||||| ||||| ||||| ||||| Sbjct 1781 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 1722 Query 68827 ACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCC 68886 || | || |||||| | ||||| | ||||||| || |||| ||| ||||| Sbjct 1721 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTA-ATG-----AATCC 1668 Query 68887 CAA--AGATCAGATGGTA--CAACATTCC--AAAGATCGTATTGTAGAATTCCGTTACTT 68940 || | || || |||| | | | || ||||||| | ||||| | || | | Sbjct 1667 CAGTCATATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGAT 1608 Query 68941 GCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCC 69000 ||| ||||| | | | || ||||| ||||| ||| || || |||| ||||||| Sbjct 1607 GCAGGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCC 1548 Query 69001 TCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGA 69060 || || ||| | | |||||| ||||| ||||| | |||| || || | ||||||| | Sbjct 1547 TCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGC 1488 Query 69061 CTATCGAATGGATAATGTAAA-AGAATAAATGCATCTGCCAATCCCTGAACCCCAATACC 69119 ||| ||||| |||| | || | || || ||||||||||| || || || |||| | | Sbjct 1487 GAATCAAATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGC 1429 Query 69120 GATAGGTCTATGTCTCTTATTTGA---ACTTTCAGCTTCTGGAATAGGATAATAATTAAT 69176 || ||||| | |||| ||||||| ||| ||| ||| || |||||| || || | Sbjct 1428 AATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCT 1372 Query 69177 ATCTATAATTTTATT-AAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAA 69235 ||| || |||||||| ||| ||| | | || || || | || | || || || Sbjct 1371 ATCGATGATTTTATTCAAGTTTTTAGTC-ACAACCTTTGTAATTTCATGTAACTTCTCAA 1313 Query 69236 AAT----CAAATCGTCCATCT-ATAAC---AAACATATTCAG----TGCTACAGATGCTA 69283 | | | || || | | | || || |||| || ||| ||| ||| |||| Sbjct 1312 AGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTA 1253 Query 69284 GATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTAC 69343 ||||||||||||| || | || || ||||| | || || |||| ||| Sbjct 1252 AATTACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGG 1193 Query 69344 TACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAA 69403 | |||||||| |||| |||||| |||||| || |||||||| || ||||| || | Sbjct 1192 AAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATA 1133 Query 69404 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCA-AACGACCCTA 69462 || || || |||||||||||| | |||| ||| | || || | ||| ||| | Sbjct 1132 ACATGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGT- 1074 Query 69463 GCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGA 69520 || || ||| | ||| | | || | ||| ||||||||| ||||||| || || Sbjct 1073 GCTTTAATT--GTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGA 1016 Query 69521 ATTCATCTCCCCAAACATCATCCAATCCAGG 69551 ||||||| || | |||||| ||| ||||| Sbjct 1015 ATTCATCACCATATACATCACTCAAACCAGG 985 Score = 257 bits (284), Expect = 2e-63 Identities = 548/813 (67%), Gaps = 8/813 (1%) Strand=Plus/Minus Query 69670 ttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 69729 ||||| | | ||| | ||| || | |||||| |||||||| || || | ||||| || Sbjct 950 TTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCA 891 Query 69730 ATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACT 69789 | | || |||| |||||| || || || || | || || |||||||||||| |||| Sbjct 890 AACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACC 831 Query 69790 CTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTT 69849 || | ||| |||||||| ||||| ||| ||||||| || || | ||||||| || || Sbjct 830 CTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTT 771 Query 69850 GCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAA 69909 | | ||||||| ||| || || || || || || |||| || || | |||||| Sbjct 770 GATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACAT 711 Query 69910 CGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAG 69969 |||||| || ||||| ||||| || ||| ||| || |||| || | ||||| Sbjct 710 TCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACAT 651 Query 69970 CTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAAC 70029 ||||||||||| | ||| |||| ||| || | || ||||| || || ||||| Sbjct 650 GAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAA 591 Query 70030 CATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAAT 70088 | | | || | || ||| || ||||||||| | || || ||||| ||| |||||| Sbjct 590 TACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC-ATGAAT 532 Query 70089 TCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTT 70148 || | || || | ||| | | ||| || || | ||| | | ||| ||||||| | Sbjct 531 ACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTTATTCT 472 Query 70149 CAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTC 70208 || || || |||| | ||||| || ||||||||||| || |||||||| || Sbjct 471 TAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTCTCTATC 412 Query 70209 GTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAGG 70268 ||| ||| || || || | ||| | || ||| || || ||| | Sbjct 411 ATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGTCTCCTT 352 Query 70269 TGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCAT 70328 ||| || || |||| |||||||||||||||||| || ||| | ||| | | | Sbjct 351 TGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGATTAAC 292 Query 70329 TACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGC 70388 || ||| ||| || |||||| ||| ||||| ||||| || || | ||| || || Sbjct 291 AACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTAGCAGC 232 Query 70389 TAGAATAGCATAGTCAGGATG--TTG-TGTAGTACAAGTAGCTGCTATTTCCGCAGCTAA 70445 | | ||||| || ||||| | | ||| || ||| ||| | |||| |||||||| Sbjct 231 CAATACCGCATAATCTGGATGGATAGTTGTCATATAAGCAGCAG---TTTCAGCAGCTAA 175 Query 70446 CGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 |||||||||| | ||||||||| || | ||| Sbjct 174 ATTATCTAATTCGACAGTTGTAACACCATCATA 142 >seq4829 Length=1098 Score = 253 bits (280), Expect = 3e-62 Identities = 562/836 (67%), Gaps = 18/836 (2%) Strand=Plus/Minus Query 39377 GATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAAT 39436 || || || ||||| || || || ||||| || | | ||| |||| | | |||||| Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014 Query 39437 TCTGAAATCAAT---CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTC 39493 | ||||| | |||||||||||||| || | || ||||| || |||| Sbjct 1013 GC---AATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTC 957 Query 39494 ATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGC 39552 || || | | || || ||||| || || || | | | ||||||| | || || ||||| Sbjct 956 ATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTT-CAATATCAACGGC 898 Query 39553 CTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACAT 39612 || || || || | | || | | || || | ||| |||||| ||| | Sbjct 897 TTCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAG 838 Query 39613 TAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGT 39672 || || || || || ||||| || |||||||||| ||| | ||||| || || || Sbjct 837 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 778 Query 39673 GAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAA 39732 | || ||||| | ||| | |||||| | ||| || |||| ||||| || ||||| || Sbjct 777 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 718 Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATG 39792 ||| || ||||| || || |||||||| || | |||||| | | || ||| |||| Sbjct 717 GAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATC 658 Query 39793 T---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGC 39849 | ||||| || ||||| || || || | ||| | ||| || |||||||| || || Sbjct 657 TGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGC 598 Query 39850 ATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATA 39909 ||| || | | | |||| | |||||| | || ||||| || || | | ||| Sbjct 597 ATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATA 538 Query 39910 CATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 39969 |||| ||||| |||||||| ||| || || || || || |||||| | || || | Sbjct 537 AGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGG 478 Query 39970 AATTTGTACCTC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTA 40027 |||||| || || | | ||| ||| | | ||||||||||| ||||| |||||| | Sbjct 477 AATTTGAACATCACTTGAGAAATTCT--CAACTAAATTTTCATTGACTATACCATCAGAA 420 Query 40028 GCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTA 40084 || ||||| || || | || | ||| || || |||||| ||||| || Sbjct 419 GCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTG 360 Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144 ||||| |||| | |||||| || | ||| | ||| || || ||||| || || || ||| Sbjct 359 TTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCT 300 Query 40145 GCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCT 40200 ||||| |||||||| | ||| || || |||| | |||||||| | |||||| || Sbjct 299 GCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686859102148320