Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4829 264 9e-66 seq4735 127 2e-24 >seq4829 Length=1098 Score = 264 bits (292), Expect = 9e-66 Identities = 424/601 (71%), Gaps = 20/601 (3%) Strand=Plus/Plus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 |||||||| | |||||||| | ||||| || || |||||||||||||| || ||| | Sbjct 244 AGGTTTGTTCTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAA 303 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGAT--- 43812 || || || ||||| || || ||| ||||| | | ||||| || ||| |||||| Sbjct 304 GCATCTTTCTGGACTGCGGAGGAAATTGATCTCTCCAAAGATTT-GCATGATTGGAACAA 362 Query 43813 TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 | ||| || | | |||| | || || || ||| | ||||| |||||||| Sbjct 363 TAGATTGAACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTC 422 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAG--AAGTTCAATTACCA 43930 || || ||||||||||||||||| ||| | || | |||| | |||||| | ||| Sbjct 423 TGATGGTATAGTCAATGAAAATTTAGTTGA--GAATTTCTCAAGTGATGTTCAAATTCCA 480 Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990 || || |||||| |||||||| |||||| || ||||| ||||||||||||| || Sbjct 481 GAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTAT 540 Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAA 44046 | | |||| ||||| |||||||||||| || | | ||| || || || || Sbjct 541 TCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAAAGTGAAT--TC--TTATTCAA 596 Query 44047 TGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT--- 44103 ||| || |||||| | || || || | || || || ||||| | |||||||| Sbjct 597 TGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCTTTAAAATGGATTGC 656 Query 44104 AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTT 44163 | || | ||| | |||| ||| | | || || ||||| | ||| ||||| ||||| Sbjct 657 AGATAAAGATGCATTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTT 716 Query 44164 CTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223 ||| || || || ||||| |||| || ||||| || || ||||||||||||| || || Sbjct 717 CTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTT 776 Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283 |||||| || || ||| | || || | |||||||| |||||| |||||||||||| || Sbjct 777 GACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTT 836 Query 44284 G 44284 | Sbjct 837 G 837 >seq4735 Length=2283 Score = 127 bits (140), Expect = 2e-24 Identities = 379/580 (65%), Gaps = 26/580 (4%) Strand=Plus/Plus Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301 ||||||||| || |||||| || ||| || || | |||||||||| || | | Sbjct 681 AATTGGAGGTTTAGATAAAGAATTCACTGCTATTTTCAGAAGAGCATTTGCATCAAGAAT 740 Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTT 19360 ||| | ||| ||| ||| | || |||| ||| | || | || | || || | Sbjct 741 CTTTCCACCAGGTGTTATTGAGAAAATGGGCATG-ACGCACATCAAAGGTATGTTACTCT 799 Query 19361 ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA--- 19417 | || || || ||| ||| ||||| || ||||| ||| || | |||| | |||| Sbjct 800 ACGGTCCCCCTGGTACTGGTAAAACCTTGATTGCTAGACAAATCGGTAAGATGCTTAATG 859 Query 19418 CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAAT 19477 |||| |||| |||||||| || || |||||||| || || ||||| ||| || Sbjct 860 CAAAGGAACCA---AAAATTGTCAACGGACCTGAAATTTTGTCCAAGTATGTCGGTTCAT 916 Query 19478 CGGAAGAAAATGTACGACGTTTGTT------TGCTGACGCTGAAGAAGAACAAAAACGTT 19531 | ||||| || | || |||||| ||| || | |||| | || ||||| | | Sbjct 917 CTGAAGAGAACATTCGTAATTTGTTCAAGGATGCAGAGGATGAATAC-AAGAAAAAGGGT 975 Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591 | | | | || | || ||||| || | ||||||||||| | | | || | Sbjct 976 GATGCGTC-----TGCTCTACATATTATCATCTTTGATGAATTGGATTCCGTTTTCAAAC 1030 Query 19592 AAAGAGGTTCTGG------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645 |||||||||| | || || ||| || || | |||||||||||| | || Sbjct 1031 AAAGAGGTTCAAGAGGCGATGGAACTGGTGTTGCGGATAATGTTGTCAATCAGTTGTTGG 1090 Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705 | || | || ||||| | ||| | |||||||| || || ||||| |||||||||||| Sbjct 1091 CTAAGATGGATGGTGTCGATCAATTAAATAATATATTGGTCATTGGTATGACTAATAGAA 1150 Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765 || ||||| ||||| ||| || | |||| ||| | || || | | | |||||| Sbjct 1151 GAGATTTAATTGACAGTGCCCTACTGAGACCTGGTAGATTTGAGGTTCAAGTTGAAATTC 1210 Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACAT 19805 | ||||| |||||| || | || ||||||| || || Sbjct 1211 ATTTACCTGATGAAGAAGGTAGATTGCAAATTTTGAAAAT 1250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397427962956940