Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5022 197 2e-45 seq2767 89.7 6e-13 >seq5022 Length=2556 Score = 197 bits (218), Expect = 2e-45 Identities = 495/743 (67%), Gaps = 22/743 (3%) Strand=Plus/Minus Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727 ||||||||| || ||||| || | |||||| ||| || || | ||||| || Sbjct 1839 GTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGG 1780 Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787 |||||||||||| || | ||| | ||||| | || || || || ||||||||||| | Sbjct 1779 TTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAAC 1720 Query 110788 CA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG 110845 | || || | | | || || || ||||||| ||||| | ||||||||| Sbjct 1719 AAGCAATGAATTTCTCAAA--CCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 1662 Query 110846 TAGTTGAGCTTGGTTT-CACCTT--CCCACATGTCAAACTGAAGCACCCCTTGGGACGCG 110902 || | || |||||| | ||| |||| | |||||||| || | |||||||| || Sbjct 1661 TA--TAAG-TTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCA 1605 Query 110903 GGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCC 110962 ||||| || ||||| || ||||| | || | || |||||| || |||||| Sbjct 1604 GGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCC 1545 Query 110963 AGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA 111022 | | || ||||| ||||||||||| || || ||||| ||||| ||||| ||| Sbjct 1544 AAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAA 1485 Query 111023 TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 111082 ||||||| | | ||| || || |||| || | |||||| ||||| | | |||| Sbjct 1484 TCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATT 1425 Query 111083 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 111142 ||||||| || |||||| || | | ||||| ||||| ||||| | ||||| || ||| Sbjct 1424 GGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTATCGATG 1365 Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA-----AT 111197 | | || | ||||| || |||| |||||| |||||||| | || ||| | | Sbjct 1364 ATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATAC 1305 Query 111198 CAAAAGTGCGAGTC-TC---TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253 ||| ||| | ||| || |||| ||| | || | || | || ||||| Sbjct 1304 CAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCTAAATTA 1248 Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313 ||||| || || || || || || || | |||||| ||||| |||||| Sbjct 1247 CAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGAT 1188 Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373 || || |||||||| | ||| ||| |||||||| || |||||||| || | |||| Sbjct 1187 TTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATG 1128 Query 111374 TAGGGCGTCCCCGTCTCCGTCTG 111396 | || || || || || || || Sbjct 1127 AAAGGTGTACCAGTTTCAGTTTG 1105 Score = 109 bits (120), Expect = 7e-19 Identities = 231/342 (68%), Gaps = 2/342 (1%) Strand=Plus/Minus Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| |||| | ||||| | || ||| ||||| || | || |||||||||||| ||| Sbjct 869 CCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCA 810 Query 111773 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 111832 | ||| |||||| || || |||| ||| | | | ||| | || ||| || || Sbjct 809 TTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGT 750 Query 111833 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 111892 | ||||||||| ||||| || || || ||||| || | | ||| |||||||| Sbjct 749 AACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATA 690 Query 111893 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 111952 || | || || || ||||| | || | | ||| || ||||| || |||||| Sbjct 689 CCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGA 630 Query 111953 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTC 112011 ||||| | |||||| || ||||| | || || |||| |||||| | |||||| | Sbjct 629 GTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAA-ATACCTCTTTGACATCAAATT 571 Query 112012 GTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053 || || || | ||||||||||| || || || || || || Sbjct 570 ATAAGTTTCAATAACAGAATCAATATCATCACCATGAATACC 529 >seq2767 Length=2694 Score = 89.7 bits (98), Expect = 6e-13 Identities = 271/414 (65%), Gaps = 5/414 (1%) Strand=Plus/Minus Query 11444 ATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTA 11503 || || |||||||| | |||||| | || | || || | | || || |||||| Sbjct 1739 ATTTTACGATCAAATCTACCCGGTCTTAGCAAAGCTGGGTCCAAAACGTCAACACGATTA 1680 Query 11504 GTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAAT 11563 || | |||| ||| |||| | ||| | ||| |||||||| ||| || | Sbjct 1679 GTACCTGCAAAAACAACAACATGATCGTCAGACTTAAATCCATCCATTTCGACTAGAAGC 1620 Query 11564 TGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGT-TGC-- 11620 ||||| | || | |||||| |||||||| || |||||| | | | | | || Sbjct 1619 TGATTTAAGGTGTTTTCTCTTTCATCATTACCTCCCATACCTCTTCCCTTTCCTCTGGAT 1560 Query 11621 TTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 11680 || || | ||||| || ||||||| ||| |||||| ||||| |||||| | || | Sbjct 1559 TTTCCGATAGCATCGATTTCATCAACGAAAACAATAGATGGTGCATTTTCTCTTGCAGTC 1500 Query 11681 TCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG 11740 | || | || ||||| | | ||||| |||||||||||||| |||||||| | | Sbjct 1499 TTGAACAACTCACGAACACGTGACGCACCAACACCAACAAACATTTCCACAAATTCAGAA 1440 Query 11741 GCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 11799 |||| || | | ||| || || || |||||| || ||||| || || | || Sbjct 1439 CCAGA-AACAGAGTAGAACGGAACCCCTGCTTCACCAGCAGTGGCTTTAGCAAGTAACGT 1381 Query 11800 CTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 || || ||||| || ||| | || || ||||| |||||||| || || Sbjct 1380 TTTACCTGTACCGGGTGGACCATTTAAAATAGCACCTCGAGGGATCTTTGCGCC 1327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627986561884800