Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5022 197 2e-45
seq2767 89.7 6e-13
>seq5022
Length=2556
Score = 197 bits (218), Expect = 2e-45
Identities = 495/743 (67%), Gaps = 22/743 (3%)
Strand=Plus/Minus
Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727
||||||||| || ||||| || | |||||| ||| || || | ||||| ||
Sbjct 1839 GTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGG 1780
Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787
|||||||||||| || | ||| | ||||| | || || || || ||||||||||| |
Sbjct 1779 TTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAAC 1720
Query 110788 CA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG 110845
| || || | | | || || || ||||||| ||||| | |||||||||
Sbjct 1719 AAGCAATGAATTTCTCAAA--CCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 1662
Query 110846 TAGTTGAGCTTGGTTT-CACCTT--CCCACATGTCAAACTGAAGCACCCCTTGGGACGCG 110902
|| | || |||||| | ||| |||| | |||||||| || | |||||||| ||
Sbjct 1661 TA--TAAG-TTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCA 1605
Query 110903 GGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCC 110962
||||| || ||||| || ||||| | || | || |||||| || ||||||
Sbjct 1604 GGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCC 1545
Query 110963 AGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA 111022
| | || ||||| ||||||||||| || || ||||| ||||| ||||| |||
Sbjct 1544 AAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAA 1485
Query 111023 TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 111082
||||||| | | ||| || || |||| || | |||||| ||||| | | ||||
Sbjct 1484 TCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATT 1425
Query 111083 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 111142
||||||| || |||||| || | | ||||| ||||| ||||| | ||||| || |||
Sbjct 1424 GGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTATCGATG 1365
Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA-----AT 111197
| | || | ||||| || |||| |||||| |||||||| | || ||| | |
Sbjct 1364 ATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATAC 1305
Query 111198 CAAAAGTGCGAGTC-TC---TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253
||| ||| | ||| || |||| ||| | || | || | || |||||
Sbjct 1304 CAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCTAAATTA 1248
Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313
||||| || || || || || || || | |||||| ||||| ||||||
Sbjct 1247 CAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGAT 1188
Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373
|| || |||||||| | ||| ||| |||||||| || |||||||| || | ||||
Sbjct 1187 TTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATG 1128
Query 111374 TAGGGCGTCCCCGTCTCCGTCTG 111396
| || || || || || || ||
Sbjct 1127 AAAGGTGTACCAGTTTCAGTTTG 1105
Score = 109 bits (120), Expect = 7e-19
Identities = 231/342 (68%), Gaps = 2/342 (1%)
Strand=Plus/Minus
Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772
||| |||| | ||||| | || ||| ||||| || | || |||||||||||| |||
Sbjct 869 CCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCA 810
Query 111773 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 111832
| ||| |||||| || || |||| ||| | | | ||| | || ||| || ||
Sbjct 809 TTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGT 750
Query 111833 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 111892
| ||||||||| ||||| || || || ||||| || | | ||| ||||||||
Sbjct 749 AACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATA 690
Query 111893 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 111952
|| | || || || ||||| | || | | ||| || ||||| || ||||||
Sbjct 689 CCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGA 630
Query 111953 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTC 112011
||||| | |||||| || ||||| | || || |||| |||||| | |||||| |
Sbjct 629 GTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAA-ATACCTCTTTGACATCAAATT 571
Query 112012 GTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053
|| || || | ||||||||||| || || || || || ||
Sbjct 570 ATAAGTTTCAATAACAGAATCAATATCATCACCATGAATACC 529
>seq2767
Length=2694
Score = 89.7 bits (98), Expect = 6e-13
Identities = 271/414 (65%), Gaps = 5/414 (1%)
Strand=Plus/Minus
Query 11444 ATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTA 11503
|| || |||||||| | |||||| | || | || || | | || || ||||||
Sbjct 1739 ATTTTACGATCAAATCTACCCGGTCTTAGCAAAGCTGGGTCCAAAACGTCAACACGATTA 1680
Query 11504 GTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAAT 11563
|| | |||| ||| |||| | ||| | ||| |||||||| ||| || |
Sbjct 1679 GTACCTGCAAAAACAACAACATGATCGTCAGACTTAAATCCATCCATTTCGACTAGAAGC 1620
Query 11564 TGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGT-TGC-- 11620
||||| | || | |||||| |||||||| || |||||| | | | | | ||
Sbjct 1619 TGATTTAAGGTGTTTTCTCTTTCATCATTACCTCCCATACCTCTTCCCTTTCCTCTGGAT 1560
Query 11621 TTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 11680
|| || | ||||| || ||||||| ||| |||||| ||||| |||||| | || |
Sbjct 1559 TTTCCGATAGCATCGATTTCATCAACGAAAACAATAGATGGTGCATTTTCTCTTGCAGTC 1500
Query 11681 TCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG 11740
| || | || ||||| | | ||||| |||||||||||||| |||||||| | |
Sbjct 1499 TTGAACAACTCACGAACACGTGACGCACCAACACCAACAAACATTTCCACAAATTCAGAA 1440
Query 11741 GCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 11799
|||| || | | ||| || || || |||||| || ||||| || || | ||
Sbjct 1439 CCAGA-AACAGAGTAGAACGGAACCCCTGCTTCACCAGCAGTGGCTTTAGCAAGTAACGT 1381
Query 11800 CTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
|| || ||||| || ||| | || || ||||| |||||||| || ||
Sbjct 1380 TTTACCTGTACCGGGTGGACCATTTAAAATAGCACCTCGAGGGATCTTTGCGCC 1327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627986561884800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |