Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5022 214 2e-50 seq4829 104 3e-17 >seq5022 Length=2556 Score = 214 bits (236), Expect = 2e-50 Identities = 688/1051 (65%), Gaps = 34/1051 (3%) Strand=Plus/Minus Query 117840 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 117899 ||||| ||||| || ||||||||||||| |||||| |||| | |||||| || | || Sbjct 2141 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 2082 Query 117900 TTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 117959 || | |||||| ||| || || ||||||| ||| || ||||| | | | Sbjct 2081 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 2022 Query 117960 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAG 118019 || | ||| || |||||||| || | ||| | ||| ||||| |||||| | || Sbjct 2021 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 1962 Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079 | || ||| || || | || |||| | | || || || || ||| | || Sbjct 1961 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 1902 Query 118080 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTCCACGAG 118135 || | | |||||| || || |||||| || || | | ||| ||| || | Sbjct 1901 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-AT 1846 Query 118136 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCG 118194 || ||||||| || ||||| || | | ||| ||| || ||||||| | Sbjct 1845 ATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 1787 Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254 |||| || |||||||| || |||| ||| | ||||| | ||| || || || ||||| | Sbjct 1786 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 1727 Query 118255 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCC 118314 |||| | || | || | | ||| || || | || ||||| | | |||| Sbjct 1726 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 1667 Query 118315 AGTCGTAGTTGAGCT--TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372 |||| || | || | ||| || | ||| | ||||||||| |||| ||||||||| Sbjct 1666 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 1609 Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 118430 || || ||||| ||||| ||||||||||| || || ||| | ||||| || Sbjct 1608 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATAGATAATTCAACACTT 1551 Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490 ||||| | || || ||||| || ||||||||||| || ||||| | |||| || || Sbjct 1550 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 1491 Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 |||||||| | | || ||| || || |||| || | |||||||||||| | Sbjct 1490 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 1431 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610 ||||||| | | ||||||||| || ||| || || || || ||||| | || ||| Sbjct 1430 GCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTA 1371 Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC---G 118667 ||||| | |||| | ||||| || ||||||||||| |||||||| | ||| || | Sbjct 1370 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAG 1311 Query 118668 TAAT--CAAAACTGCGAGTC-TC---TTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 | || ||| | | | ||| || |||| ||| | ||| | || | || Sbjct 1310 TTATACCAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCT 1254 Query 118722 AGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 | |||||| || | || || || | || | || || | |||||| ||| || | Sbjct 1253 AAATTACAAACTGCTGTTTCCTCAGGTGAT--GAATATTCAACAATTTCACAGCATAAAT 1196 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | ||| || || ||||| || | |||||| || || ||||||| |||||||| | Sbjct 1195 TGGAAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTAT 1136 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 | | |||| | || || || || || ||||| Sbjct 1135 ATAACATGAAAGGTGTACCAGTTTCAGTTTG 1105 >seq4829 Length=1098 Score = 104 bits (114), Expect = 3e-17 Identities = 326/493 (66%), Gaps = 19/493 (4%) Strand=Plus/Minus Query 130049 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 130108 || || || || ||||| || ||||||||| | ||| | ||| ||||||||||| || Sbjct 797 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 738 Query 130109 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCA 130168 | |||||| ||||||||||| || || || ||| || || || | | | ||| Sbjct 737 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 678 Query 130169 GCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGAT 130227 ||||| | | |||| | | ||| ||| || | ||||| | ||||||| || ||| Sbjct 677 GCAAA-CAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGAT 619 Query 130228 ACACGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 130284 ||| |||| || | || || || | |||| ||| |||| || |||||||||||| Sbjct 618 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 562 Query 130285 GTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCATTT-CATTATGGCACTGAT 130343 ||| |||| || | | ||||| ||||| ||| | ||| ||| || || Sbjct 561 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 503 Query 130344 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAAATTGTTATTGATAT 130403 || | |||||| | || || || || || ||| || ||||| | | | || Sbjct 502 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 443 Query 130404 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 130460 | ||| || || ||||| || ||||||| ||||| || | | | | | |||| Sbjct 442 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 383 Query 130461 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCT 130517 | |||||| ||||||| | ||||| || | | ||| || |||||||| | | Sbjct 382 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 326 Query 130518 CCTCCGCAGTCCA 130530 ||||||||||||| Sbjct 325 CCTCCGCAGTCCA 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618390456213280