Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5022 214 2e-50
seq4829 104 3e-17
>seq5022
Length=2556
Score = 214 bits (236), Expect = 2e-50
Identities = 688/1051 (65%), Gaps = 34/1051 (3%)
Strand=Plus/Minus
Query 117840 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 117899
||||| ||||| || ||||||||||||| |||||| |||| | |||||| || | ||
Sbjct 2141 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 2082
Query 117900 TTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 117959
|| | |||||| ||| || || ||||||| ||| || ||||| | | |
Sbjct 2081 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 2022
Query 117960 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAG 118019
|| | ||| || |||||||| || | ||| | ||| ||||| |||||| | ||
Sbjct 2021 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 1962
Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079
| || ||| || || | || |||| | | || || || || ||| | ||
Sbjct 1961 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 1902
Query 118080 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTCCACGAG 118135
|| | | |||||| || || |||||| || || | | ||| ||| || |
Sbjct 1901 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-AT 1846
Query 118136 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCG 118194
|| ||||||| || ||||| || | | ||| ||| || ||||||| |
Sbjct 1845 ATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 1787
Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254
|||| || |||||||| || |||| ||| | ||||| | ||| || || || ||||| |
Sbjct 1786 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 1727
Query 118255 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCC 118314
|||| | || | || | | ||| || || | || ||||| | | ||||
Sbjct 1726 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 1667
Query 118315 AGTCGTAGTTGAGCT--TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372
|||| || | || | ||| || | ||| | ||||||||| |||| |||||||||
Sbjct 1666 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 1609
Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 118430
|| || ||||| ||||| ||||||||||| || || ||| | ||||| ||
Sbjct 1608 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATAGATAATTCAACACTT 1551
Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490
||||| | || || ||||| || ||||||||||| || ||||| | |||| || ||
Sbjct 1550 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 1491
Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550
|||||||| | | || ||| || || |||| || | |||||||||||| |
Sbjct 1490 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 1431
Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610
||||||| | | ||||||||| || ||| || || || || ||||| | || |||
Sbjct 1430 GCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTA 1371
Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC---G 118667
||||| | |||| | ||||| || ||||||||||| |||||||| | ||| || |
Sbjct 1370 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAG 1311
Query 118668 TAAT--CAAAACTGCGAGTC-TC---TTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721
| || ||| | | | ||| || |||| ||| | ||| | || | ||
Sbjct 1310 TTATACCAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCT 1254
Query 118722 AGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779
| |||||| || | || || || | || | || || | |||||| ||| || |
Sbjct 1253 AAATTACAAACTGCTGTTTCCTCAGGTGAT--GAATATTCAACAATTTCACAGCATAAAT 1196
Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839
| ||| || || ||||| || | |||||| || || ||||||| |||||||| |
Sbjct 1195 TGGAAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTAT 1136
Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870
| | |||| | || || || || || |||||
Sbjct 1135 ATAACATGAAAGGTGTACCAGTTTCAGTTTG 1105
>seq4829
Length=1098
Score = 104 bits (114), Expect = 3e-17
Identities = 326/493 (66%), Gaps = 19/493 (4%)
Strand=Plus/Minus
Query 130049 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 130108
|| || || || ||||| || ||||||||| | ||| | ||| ||||||||||| ||
Sbjct 797 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 738
Query 130109 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCA 130168
| |||||| ||||||||||| || || || ||| || || || | | | |||
Sbjct 737 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 678
Query 130169 GCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGAT 130227
||||| | | |||| | | ||| ||| || | ||||| | ||||||| || |||
Sbjct 677 GCAAA-CAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGAT 619
Query 130228 ACACGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 130284
||| |||| || | || || || | |||| ||| |||| || ||||||||||||
Sbjct 618 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 562
Query 130285 GTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCATTT-CATTATGGCACTGAT 130343
||| |||| || | | ||||| ||||| ||| | ||| ||| || ||
Sbjct 561 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 503
Query 130344 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAAATTGTTATTGATAT 130403
|| | |||||| | || || || || || ||| || ||||| | | | ||
Sbjct 502 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 443
Query 130404 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 130460
| ||| || || ||||| || ||||||| ||||| || | | | | | ||||
Sbjct 442 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 383
Query 130461 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCT 130517
| |||||| ||||||| | ||||| || | | ||| || |||||||| | |
Sbjct 382 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 326
Query 130518 CCTCCGCAGTCCA 130530
|||||||||||||
Sbjct 325 CCTCCGCAGTCCA 313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618390456213280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |