Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5022 212 7e-50 seq4829 89.7 6e-13 >seq5022 Length=2556 Score = 212 bits (234), Expect = 7e-50 Identities = 683/1048 (65%), Gaps = 24/1048 (2%) Strand=Plus/Plus Query 104907 CTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 104966 ||||||| || ||||||||||| | |||| | || || || || |||||| | || || Sbjct 1103 CTCAAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATCTA 1162 Query 104967 ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTA 105026 ||||| | ||||||||||| ||||| ||||||| | || ||||| | |||| | Sbjct 1163 ATCAACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATATT 1222 Query 105027 CAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 105086 || || || || || || ||||| | || | || | || | ||| | Sbjct 1223 CATCACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGTTG 1282 Query 105087 ATCCAGA-GACAAAGACATTTGAT-----TATGAAAAACTCCACGAAGTTACGAAAACTG 105140 | || ||||| || ||| | | ||| || | || ||| |||| || || Sbjct 1283 AAAGTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAAGGTTG 1342 Query 105141 TCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTA 105200 | || |||||| | || | | | || |||||||| | || || ||||| ||||| | | Sbjct 1343 TGACTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGCAAGGA 1402 Query 105201 AATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCA 105260 ||| ||||||||| || | ||||||| | | ||||| || ||| | || |||| |||| Sbjct 1403 GATCAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGCCTTCA 1462 Query 105261 TTCT-TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319 | | ||| || |||||||||| ||||| |||||| | ||| | || ||| Sbjct 1463 TGATGTTGAGATTAC-CATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAATTTTT 1521 Query 105320 GAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAG--AGGTTGATGGTC 105377 || ||||| ||||| || ||| | ||||| ||| || || | ||| ||||| | Sbjct 1522 GAAACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCTATTAGG--GATGGAC 1579 Query 105378 CATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG 105437 ||||||| || ||||| || ||||| || || ||||| | || || |||||| | |||| Sbjct 1580 CATATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTTTGGG 1639 Query 105438 --AAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAA 105495 ||| | | | | ||| || |||||||| | | ||||| ||||||| || Sbjct 1640 GTAAGAAGCCAACCAACTTA--TATGACTGGGATTCATTAAAGGAGAAAATCAAGGCCAA 1697 Query 105496 GGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTT 105555 ||| | | || | || | || |||||||| || || || || | ||||| | Sbjct 1698 TGGTTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTCAAATTCT 1757 Query 105556 GGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCG 105614 ||| | || |||||||||||||| ||||| | || || || ||| |||||| | | Sbjct 1758 AGGTTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCT-AGAAGAGTTTTAG 1816 Query 105615 CGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCT 105674 | || || || |||||||||| || | || || | || || || |||| Sbjct 1817 CCGGTGAATTCCAGATTGTCAACCCTTATATGTTGAGAGATTTAGTTGAAATGGGACTCT 1876 Query 105675 GGTCCAAGGA---TATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTG 105731 || || || |||||| | | || | || |||||| ||||| || | Sbjct 1877 GG---AATGATTCTATGAAAAACCATATCATCTCAGATAATGGTTCGATTCAGAACTTAC 1933 Query 105732 TGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGG 105791 | ||||||| | || || ||| | || || || || ||||| ||| | ||| Sbjct 1934 CGAATATTCCTCAAGAGATCAAGGACTTATATAAGACTGTCTGGGAGATCTCGCAAAAGA 1993 Query 105792 ATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATC 105851 | || || ||||| || ||| | ||| | | | ||||| ||| |||||| Sbjct 1994 CAATTATCGATATGGCTGCTGATAGAGGTGCATACGTGGATCAGTCACAATCTATGAACA 2053 Query 105852 TCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGA 105911 || || ||| |||||| ||| || | | || ||||| | || ||||||||| Sbjct 2054 TCCATTTGAAAAATCCAACAATGGGTAAATTAACGTCCATGCATTTCTATGGTTGGAAGA 2113 Query 105912 AGGGTCTCAAAACGGGGATGTATTACCT 105939 |||| ||||| || || ||||||||||| Sbjct 2114 AGGGGCTCAAGACAGGTATGTATTACCT 2141 Score = 138 bits (152), Expect = 1e-27 Identities = 308/458 (67%), Gaps = 6/458 (1%) Strand=Plus/Plus Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGG 104197 ||||||| | | | | ||||||||| ||||||| | || | ||| |||||| | | Sbjct 415 AGAGACTTCAATTATAACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGA 474 Query 104198 CTCGATGGTGTCTTGATGGAAACCCCACAGTACATGT--TCATGCGCGTGGCCATCGGTA 104255 | ||||| | |||| || || |||| | | ||| | || ||| | |||| Sbjct 475 ATAAATGGTAAGATTGCCGAAAGGCCCCA--ACATTTAATAATGAGAGTTGCCGTTGGTA 532 Query 104256 TTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATG 104314 ||||||| || || ||||||||||| | || || || | |||||| | |||||| Sbjct 533 TTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGGTAT- 591 Query 104315 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGT 104374 |||| || || | ||||| || |||||| | ||||| |||||| |||||||| Sbjct 592 TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTCA 651 Query 104375 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 104434 || ||| | | || | ||||| || || || | |||||||||| ||| | | || Sbjct 652 TGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAA 711 Query 104435 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 104494 ||||| || || || ||||| ||||||||| | || || ||| || | ||| | Sbjct 712 TGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATCA 771 Query 104495 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 104554 | | ||| |||| || || |||||| ||| |||| |||||||||||| || | Sbjct 772 ACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAGG 831 Query 104555 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGG 104592 || ||||| ||| || | ||||| | |||| ||| Sbjct 832 GTCTTTAATAACACTGCAAGGTATGTTGACCAAGGTGG 869 >seq4829 Length=1098 Score = 89.7 bits (98), Expect = 6e-13 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 94730 AAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTG-ATACAAAG 94788 ||||| | || ||||| | | || || || |||||| | || ||| ||| | | |||| Sbjct 605 AAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCTTTAAAATGGATTGCAGATAAAG 664 Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848 || || ||||| ||| | | | |||||||| |||||| ||||| ||||||||| Sbjct 665 ATGCATTG-TTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCT 723 Query 94849 GGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907 ||||| || ||| | || | ||| | || ||| ||||| | ||||||||| | || Sbjct 724 GGTTCATT-TGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTT 782 Query 94908 CTCCAACGAGCTTAT 94922 |||||||||||| || Sbjct 783 CTCCAACGAGCTGAT 797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583218601081120