Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq3095 84.2 1e-11 >seq3095 Length=4272 Score = 84.2 bits (92), Expect = 1e-11 Identities = 196/288 (68%), Gaps = 6/288 (2%) Strand=Plus/Minus Query 65093 CCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCC 65152 ||||| ||||| ||| | |||||||||||||| || ||||||| ||||| ||| || Sbjct 2453 CCAAAACCACCATGTGGAACCAATAAATTAATATTATTAGAACCAACAAAATCCTGTGCT 2394 Query 65153 ATTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGA 65211 | || ||||| | |||| ||| || ||||||||||| ||||| | |||||| | Sbjct 2393 AAACCAATAATCGATTGCA-TTAGGGATGCATCACCGTGATGGTATCCAGTATGTTCGGC 2335 Query 65212 GACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCA-G 65270 | || || ||||| | ||||| ||||| | || || |||| | ||| | Sbjct 2334 AATGTAACCTTCTAATTGCGAGACTTTAATTTCGTCCCTCAAGTTACGTTTATA-GCATG 2276 Query 65271 AATACAATAT-TTTCCGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTG 65329 ||| | || |||| | |||| || || |||||||| | | || |||| |||| Sbjct 2275 CATAGAGAATCTTTCTTTGAACT-GGCTTGAACCCATCCATAACAGAAGCAATGGATCTG 2217 Query 65330 TCACAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTCT 65377 | |||| | ||||| | || |||||||| ||||| |||||| Sbjct 2216 ACGTTATCAGCCATAGAGAAGAGGATTAATTCTTTATTAATGAATTCT 2169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235663374838200