Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq5022 105 7e-18
seq4829 87.8 2e-12
>seq5022
Length=2556
Score = 105 bits (116), Expect = 7e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787
||||||| | || ||| || |||||||| | || |||| | || || ||| ||
Sbjct 1952 TCAAGGACTTATATAAGACTGTCTGGGAGATCTCGCAAAAGACAATTATCGATATGGCTG 2011
Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847
||||| | ||||| ||| | || ||||| || ||| |||||||| || | |||||
Sbjct 2012 CTGATAGAGGTGCATACGTGGATCAGTCACAATCTATGAACATCCATTTGAAAAATCCAA 2071
Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907
|| ||| || || | || ||||| || || || ||||||||||| |||||||| ||||
Sbjct 2072 CAATGGGTAAATTAACGTCCATGCATTTCTATGGTTGGAAGAAGGGGCTCAAGACAGGTA 2131
Query 55908 TGTACTATCTGCGGACCC 55925
|||| || || | ||||
Sbjct 2132 TGTATTACCTTAGAACCC 2149
>seq4829
Length=1098
Score = 87.8 bits (96), Expect = 2e-12
Identities = 365/575 (63%), Gaps = 6/575 (1%)
Strand=Plus/Minus
Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810
||||| || ||| | ||||||||||| | |||| || || || |||| | ||
Sbjct 830 GCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCT 771
Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870
||||| | || | ||| |||||||| ||||||| || |||||| |||||| ||
Sbjct 770 GGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATA 711
Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAA---GTCATC 74927
||||| ||| ||||| || || | | | || ||| |||||| | | |||
Sbjct 710 CCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATC 651
Query 74928 CAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAG 74987
|| | ||||||||| || ||| |||| |||| || || || || | |||
Sbjct 650 CATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAAT 591
Query 74988 AGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCC 75047
| | | | | || | ||||| |||| | | ||||||| | || || || |||
Sbjct 590 AAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCC 531
Query 75048 GAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGT 75107
|||||||| || | | ||| || | |||||| | ||||||| ||| ||
Sbjct 530 GAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGA 471
Query 75108 ACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAA 75167
||||| |||| |||||| | | ||| || |||| || || || || || || ||
Sbjct 470 ACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAG 411
Query 75168 AAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGTCCCAATCC 75224
|| || || || || || ||| | |||| || | | | |||| ||||||
Sbjct 410 AACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCA 351
Query 75225 TTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTTTTG 75284
| || || | | |||||| ||||| | ||||||||| | ||||| |||
Sbjct 350 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTG 291
Query 75285 TACAAAGACCACAAGTCAGGGTAATTGATTGGAAA 75319
|||| ||| | || | || |||||||||||
Sbjct 290 TACATTTGCCAAATTTCGTGATACTTGATTGGAAA 256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547176408922400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |