Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq730 192 1e-43 seq2706 178 3e-39 seq2598 178 3e-39 seq1049 100 7e-16 >seq730 Length=387 Score = 192 bits (212), Expect = 1e-43 Identities = 172/216 (80%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| || || ||||| ||||||| ||||| |||| |||||||| || Sbjct 216 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 157 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| ||||| || || |||||||||| ||||||||| || |||||||||||||| Sbjct 156 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 97 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||||||||||||||| ||| ||||||||||| || | ||| || ||||| || || Sbjct 96 ATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAAT 37 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || || | || | |||||| Sbjct 36 GGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 1 >seq2706 Length=450 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| ||||| ||||| ||||| | ||||| || | ||||||||| || Sbjct 216 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 157 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| ||||| || || |||||||||| ||||||||| || |||||||||||||| Sbjct 156 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 97 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||||||| || ||| ||| ||||| ||||| || | || || ||||| || || Sbjct 96 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 37 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || |||||||| | || | |||||| Sbjct 36 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1 >seq2598 Length=450 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| ||||| ||||| ||||| | ||||| || | ||||||||| || Sbjct 216 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 157 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| ||||| || || |||||||||| ||||||||| || |||||||||||||| Sbjct 156 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 97 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||||||| || ||| ||| ||||| ||||| || | || || ||||| || || Sbjct 96 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 37 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || |||||||| | || | |||||| Sbjct 36 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1 >seq1049 Length=1344 Score = 100 bits (110), Expect = 7e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||||||||| || ||||| || || || ||||| |||||||||||||| Sbjct 870 GAAAATTTGACCATCAGTAATGGAAATAACGTTAGTTGGAATATATGCAGAAACATCACC 811 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 |||| ||||| | ||| ||||| || || | || |||||||| Sbjct 810 ACCTTGAGTTTCAATAACTGGTAAAGCGGTCAAAGAACCACCACC 766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192442763376872