Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 268 8e-67
>seq4829
Length=1098
Score = 268 bits (296), Expect = 8e-67
Identities = 566/837 (68%), Gaps = 17/837 (2%)
Strand=Plus/Minus
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367
||||| || |||||||| || || ||||| || ||| ||| |||||||| ||
Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014
Query 4368 GCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATT 4427
|| | || | || || || ||||| || | |||||| | ||| | || || ||
Sbjct 1013 GCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATA 954
Query 4428 CCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTTC 4486
|| | || | |||||||| |||| || || | ||||| ||| ||| ||||||||
Sbjct 953 CCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTC 895
Query 4487 TGTGATTATATCTTTTA---TTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAA 4543
|| || || | | | | |||| || | | ||| | || || | | ||| |
Sbjct 894 GGTAATGATTTGTCTGACAATTTTTTCGTCTGG-GGTATGGTTC--AAATGTGAAAAGAG 838
Query 4544 TAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGT 4603
||||| |||||||| ||| |||||||| ||||| | |||||| ||||| || |||||
Sbjct 837 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 778
Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663
|| || ||||| |||||||||||||| | ||| || || | |||||||| ||||| ||
Sbjct 777 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 718
Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTC 4723
||| || ||||| || || ||||| || || || | | ||| | |||| ||
Sbjct 717 GAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATC 658
Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783
| |||||||||||| ||||| | || |||| ||| | || || ||||| | || ||
Sbjct 657 TGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGC 598
Query 4784 GTTAAAT---AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840
|| ||| |||| || |||| ||| |||| || ||||| || || | ||
Sbjct 597 ATTGAATAAGAATTCAC---TTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGA 541
Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900
||| |||| ||||| || ||||| || ||| || || || || || ||| |||| ||
Sbjct 540 ATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTC 481
Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960
|| | |||||| || | | || | || ||||| ||||| || |||||||| |||
Sbjct 480 TGGAATTTGAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGA 421
Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TT 5017
|| ||||| ||||| | ||| || || ||| | ||| | || | | ||
Sbjct 420 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATT 361
Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077
||||| | |||||||||| | | ||||| ||| || ||||||| || || |||||
Sbjct 360 GTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTC 301
Query 5078 CGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
|| || |||||||| |||||| || |||||| || |||| | ||||| ||
Sbjct 300 TGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427019475387404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |