Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4829 268 8e-67 >seq4829 Length=1098 Score = 268 bits (296), Expect = 8e-67 Identities = 566/837 (68%), Gaps = 17/837 (2%) Strand=Plus/Minus Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367 ||||| || |||||||| || || ||||| || ||| ||| |||||||| || Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014 Query 4368 GCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATT 4427 || | || | || || || ||||| || | |||||| | ||| | || || || Sbjct 1013 GCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATA 954 Query 4428 CCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTTC 4486 || | || | |||||||| |||| || || | ||||| ||| ||| |||||||| Sbjct 953 CCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTC 895 Query 4487 TGTGATTATATCTTTTA---TTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAA 4543 || || || | | | | |||| || | | ||| | || || | | ||| | Sbjct 894 GGTAATGATTTGTCTGACAATTTTTTCGTCTGG-GGTATGGTTC--AAATGTGAAAAGAG 838 Query 4544 TAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGT 4603 ||||| |||||||| ||| |||||||| ||||| | |||||| ||||| || ||||| Sbjct 837 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 778 Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663 || || ||||| |||||||||||||| | ||| || || | |||||||| ||||| || Sbjct 777 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 718 Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTC 4723 ||| || ||||| || || ||||| || || || | | ||| | |||| || Sbjct 717 GAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATC 658 Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 | |||||||||||| ||||| | || |||| ||| | || || ||||| | || || Sbjct 657 TGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGC 598 Query 4784 GTTAAAT---AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 || ||| |||| || |||| ||| |||| || ||||| || || | || Sbjct 597 ATTGAATAAGAATTCAC---TTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGA 541 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900 ||| |||| ||||| || ||||| || ||| || || || || || ||| |||| || Sbjct 540 ATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTC 481 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 || | |||||| || | | || | || ||||| ||||| || |||||||| ||| Sbjct 480 TGGAATTTGAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGA 421 Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TT 5017 || ||||| ||||| | ||| || || ||| | ||| | || | | || Sbjct 420 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATT 361 Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077 ||||| | |||||||||| | | ||||| ||| || ||||||| || || ||||| Sbjct 360 GTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTC 301 Query 5078 CGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 || || |||||||| |||||| || |||||| || |||| | ||||| || Sbjct 300 TGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427019475387404