Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5022 250 3e-61 seq4829 235 8e-57 seq5463 102 1e-16 >seq5022 Length=2556 Score = 250 bits (276), Expect = 3e-61 Identities = 547/807 (68%), Gaps = 18/807 (2%) Strand=Plus/Minus Query 78089 ATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148 ||| | ||| || | |||||| |||||||| || || | ||||| ||| | | ||||| Sbjct 939 ATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGG 880 Query 78149 TCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208 || ||||||||| || || || | ||| || || ||||||||| | || || | |||||| Sbjct 879 TCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGG 820 Query 78209 AATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATT 78268 |||||| || || ||||| ||||| || || | ||||||| ||| ||| | |||||| Sbjct 819 AATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATT 760 Query 78269 ACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGT 78328 | || || ||| || || || || | || || || | ||| || |||||| || Sbjct 759 ATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGT 700 Query 78329 ATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 78388 ||| |||||||| || || || ||| |||| || | ||||| ||||||||| Sbjct 699 ATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTG 640 Query 78389 ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA 78448 || ||| || | ||| || | || ||||| ||||| || || | | | || Sbjct 639 ATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGA 580 Query 78449 AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTAC 78508 | | ||| || ||||||||| | || || || || |||||| || || || || Sbjct 579 CATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAAC 520 Query 78509 ACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGA 78568 | ||| | | ||| || || ||||| | ||||| ||||||| | || ||| || | Sbjct 519 TCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAA-AAG-ATAA 462 Query 78569 TT--TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATA 78626 | |||| || ||||| |||||||||||||| || |||||||| || ||| ||| Sbjct 461 CTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATT 402 Query 78627 ACAGAATTTAGTTTAT---CTTTGTATTTGGTAACAATAT-CCATGACAGTAGTTGAAAT 78682 || || || | ||| | || | ||||| ||||| | ||| | | ||||||| Sbjct 401 GCATCATCTAATATATTCGCATT-TTTTTGG--ACAATTTCCCAAGTC-TCCTTTGAAAT 346 Query 78683 AATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATC 78742 || |||| || |||||||||||||| || ||| || ||| | | | || || Sbjct 345 CATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGATTAACAACTTC 286 Query 78743 ACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAAT 78802 | ||| || |||||| ||| |||| || || | || | ||| ||||| | | Sbjct 285 AGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATAC 226 Query 78803 AGCATAATCAGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATC 78859 |||||||| ||||| | | ||| || || || || |||| || |||||| |||| Sbjct 225 CGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGCAGCTAAATTATC 169 Query 78860 TAACTCTATAGTTGTGACCCCATTATA 78886 ||| || | |||||| || |||| ||| Sbjct 168 TAATTCGACAGTTGTAACACCATCATA 142 Score = 219 bits (242), Expect = 6e-52 Identities = 763/1177 (65%), Gaps = 29/1177 (2%) Strand=Plus/Minus Query 76818 AGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGT 76877 || || |||||||| || || || ||| |||| || |||||||||||| || | | Sbjct 2141 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 2082 Query 76878 TTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCT 76937 || | |||| | ||| || ||||| || || ||||| | | | || Sbjct 2081 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 2022 Query 76938 CCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAA 76997 ||||||||||| ||||| | ||||| |||||||| | || ||||| | ||| || | Sbjct 2021 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 1962 Query 76998 ACTTGTTTGATATCATCTGGAAGGTT-TGTA--TTTTGAATGGAACCACCATCTGATATA 77054 | | ||||| || | |||| || ||| || ||||| |||||| |||||| || Sbjct 1961 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 1902 Query 77055 ATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGA 77114 || || || ||| ||||||||| | | | | || |||| |||| | | || | Sbjct 1901 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAA 1842 Query 77115 GGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATAT 77174 || || || || || ||||| || | || ||||| | || ||||||||| || || Sbjct 1841 GGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 1782 Query 77175 GGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCC 77234 ||||| | |||| |||| || | |||||||| || |||||||| ||||| ||||| Sbjct 1781 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 1722 Query 77235 ACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCC 77294 || | || |||||| | ||||| | ||||||| || |||| | | ||| || Sbjct 1721 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 1662 Query 77295 CAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT 77354 | | | | || | |||||||||| | ||||| | || | ||| Sbjct 1661 TATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGA 1602 Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 ||||| | | | || ||||| ||||| || | || || |||| ||| || ||||| Sbjct 1601 GATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAA 1542 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 || | | |||||| ||||| ||||| | |||| || || | |||||| |||| Sbjct 1541 GCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCA 1482 Query 77475 AACGGATAATGT-AAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 || || |||| | || | || ||||||||||| || || || || |||| | |||| || Sbjct 1481 AATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGG 1423 Query 77534 TCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAAT 77593 ||| | |||| |||| || | | || | || |||||| || || | || || || Sbjct 1422 TCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTATCGATGAT 1363 Query 77594 TTTATTGAGATTTCTA---ACAAC-----TACTTTAA--CCACGTCCTTTAGTTTAAGAA 77643 |||||| | ||| || ||||| || ||| | || || |||| | | Sbjct 1362 TTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTT--ATAC 1305 Query 77644 AATCAAATCTT-CCATC---TATAACAAA--CATGTTCAAAGCTATAGATGCTAGATTAC 77697 | || |||| |||| | |||||| || | ||| || | | |||| ||||| Sbjct 1304 CAACAGTTCTTGTCATCACTTTCAACAAATGCAGG--CAATGCAACACTAGCTAAATTAC 1247 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 |||||||| || | || | ||||| | || || |||| ||| | ||| Sbjct 1246 AAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATT 1187 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAA 77817 ||||| |||| ||||||||| || || || || |||| |||||||| | || | Sbjct 1186 TGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGA 1127 Query 77818 ACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTT 77875 | || || || |||||| | || | ||| | || || | ||| | ||| | ||||| Sbjct 1126 AAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATA--ACTTTTGTGCTTT 1069 Query 77876 TATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATC 77935 || | || || | ||||||||||||| ||||||| || |||||||| Sbjct 1068 AATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATC 1009 Query 77936 TCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 || | |||||| ||| ||||| |||| | ||| Sbjct 1008 ACCATATACATCACTCAAACCAGGTGCTTCACTAGGG 972 >seq4829 Length=1098 Score = 235 bits (260), Expect = 8e-57 Identities = 558/836 (67%), Gaps = 18/836 (2%) Strand=Plus/Minus Query 47901 GATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAAT 47960 || || || |||||||| || |||||||| | | || | |||| | | |||||| Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014 Query 47961 TCTGAAATCAGT---CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTC 48017 | ||||||| ||||||||||| || || | ||| ||||| || |||| Sbjct 1013 GC---AATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTC 957 Query 48018 ATTCCTATAAGTTTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGC 48076 || || | | || || ||||| || || || ||| | ||||| ||| ||| || || Sbjct 956 ATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGC 898 Query 48077 ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACAT 48136 || || || | | || ||| || ||| | || ||||||| ||| | Sbjct 897 TTCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAG 838 Query 48137 TAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 48196 ||||| |||||||| ||| | |||||||||||||| ||| | ||||| || || || Sbjct 837 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 778 Query 48197 GAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAA 48256 | ||| ||||| | || | ||||| | ||| || || | || || || ||||| || Sbjct 777 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 718 Query 48257 GAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTG 48316 ||| || ||||| || || |||||||| | |||||| | | || || || | Sbjct 717 GAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATC 658 Query 48317 T---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGC 48373 | ||||| | ||||| || ||||| | ||| | ||| || |||||||| || || Sbjct 657 TGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGC 598 Query 48374 ATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATA 48433 ||| || | || | |||| || |||||| | ||||||||| || || | | ||| Sbjct 597 ATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATA 538 Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493 |||| || ||||| ||||| || || || || || || |||||| | || |||| Sbjct 537 AGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGG 478 Query 48494 GATCTGTACCTCCGT--ACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTA 48551 || || || || | | ||| || ||| | ||||| ||||| ||||| |||||| | Sbjct 477 AATTTGAACATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAA 420 Query 48552 GCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTA 48608 |||||||| || |||| || | ||| || || |||| || ||| | || Sbjct 419 GCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTG 360 Query 48609 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCT 48668 ||||| |||| | |||||| || | ||| | ||| || || ||||| || ||||| ||| Sbjct 359 TTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCT 300 Query 48669 GCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724 || || || ||||| | ||| || || || | |||||| || | |||||| || Sbjct 299 GCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 >seq5463 Length=2400 Score = 102 bits (112), Expect = 1e-16 Identities = 180/260 (69%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 ||| || | ||| || ||||||||||||||||||| ||||| | ||| |||||| || Sbjct 1035 CATGAACATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTT 976 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || |||||| | | || |||||| || | || |||| ||||||||| |||| ||| Sbjct 975 CCCATGATTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATA 916 Query 78131 TATTGCCATA-ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189 || ||| | | | || |||| ||| || || ||||| || | |||| || || || Sbjct 915 TA-TGCAAAATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAAT 857 Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAAC 78249 | | ||| | ||||| || || | |||| || | ||||| | || || ||| Sbjct 856 TGAATACTTTTAACATAGGGATTAAACCGGATGAAATCCCATTACTACCGTTGATGTAAG 797 Query 78250 TTCCACTTGCGCGAATATTA 78269 | ||||| || | |||||| Sbjct 796 TACCACTGGCTCTTATATTA 777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694618540712320