Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq5022 250 3e-61
seq4829 235 8e-57
seq5463 102 1e-16
>seq5022
Length=2556
Score = 250 bits (276), Expect = 3e-61
Identities = 547/807 (68%), Gaps = 18/807 (2%)
Strand=Plus/Minus
Query 78089 ATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148
||| | ||| || | |||||| |||||||| || || | ||||| ||| | | |||||
Sbjct 939 ATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGG 880
Query 78149 TCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208
|| ||||||||| || || || | ||| || || ||||||||| | || || | ||||||
Sbjct 879 TCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGG 820
Query 78209 AATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATT 78268
|||||| || || ||||| ||||| || || | ||||||| ||| ||| | ||||||
Sbjct 819 AATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATT 760
Query 78269 ACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGT 78328
| || || ||| || || || || | || || || | ||| || |||||| ||
Sbjct 759 ATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGT 700
Query 78329 ATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 78388
||| |||||||| || || || ||| |||| || | ||||| |||||||||
Sbjct 699 ATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTG 640
Query 78389 ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA 78448
|| ||| || | ||| || | || ||||| ||||| || || | | | ||
Sbjct 639 ATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGA 580
Query 78449 AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTAC 78508
| | ||| || ||||||||| | || || || || |||||| || || || ||
Sbjct 579 CATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAAC 520
Query 78509 ACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGA 78568
| ||| | | ||| || || ||||| | ||||| ||||||| | || ||| || |
Sbjct 519 TCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAA-AAG-ATAA 462
Query 78569 TT--TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATA 78626
| |||| || ||||| |||||||||||||| || |||||||| || ||| |||
Sbjct 461 CTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATT 402
Query 78627 ACAGAATTTAGTTTAT---CTTTGTATTTGGTAACAATAT-CCATGACAGTAGTTGAAAT 78682
|| || || | ||| | || | ||||| ||||| | ||| | | |||||||
Sbjct 401 GCATCATCTAATATATTCGCATT-TTTTTGG--ACAATTTCCCAAGTC-TCCTTTGAAAT 346
Query 78683 AATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATC 78742
|| |||| || |||||||||||||| || ||| || ||| | | | || ||
Sbjct 345 CATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGATTAACAACTTC 286
Query 78743 ACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAAT 78802
| ||| || |||||| ||| |||| || || | || | ||| ||||| | |
Sbjct 285 AGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATAC 226
Query 78803 AGCATAATCAGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATC 78859
|||||||| ||||| | | ||| || || || || |||| || |||||| ||||
Sbjct 225 CGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGCAGCTAAATTATC 169
Query 78860 TAACTCTATAGTTGTGACCCCATTATA 78886
||| || | |||||| || |||| |||
Sbjct 168 TAATTCGACAGTTGTAACACCATCATA 142
Score = 219 bits (242), Expect = 6e-52
Identities = 763/1177 (65%), Gaps = 29/1177 (2%)
Strand=Plus/Minus
Query 76818 AGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGT 76877
|| || |||||||| || || || ||| |||| || |||||||||||| || | |
Sbjct 2141 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 2082
Query 76878 TTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCT 76937
|| | |||| | ||| || ||||| || || ||||| | | | ||
Sbjct 2081 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 2022
Query 76938 CCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAA 76997
||||||||||| ||||| | ||||| |||||||| | || ||||| | ||| || |
Sbjct 2021 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 1962
Query 76998 ACTTGTTTGATATCATCTGGAAGGTT-TGTA--TTTTGAATGGAACCACCATCTGATATA 77054
| | ||||| || | |||| || ||| || ||||| |||||| |||||| ||
Sbjct 1961 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 1902
Query 77055 ATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGA 77114
|| || || ||| ||||||||| | | | | || |||| |||| | | || |
Sbjct 1901 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAA 1842
Query 77115 GGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATAT 77174
|| || || || || ||||| || | || ||||| | || ||||||||| || ||
Sbjct 1841 GGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 1782
Query 77175 GGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCC 77234
||||| | |||| |||| || | |||||||| || |||||||| ||||| |||||
Sbjct 1781 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 1722
Query 77235 ACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCC 77294
|| | || |||||| | ||||| | ||||||| || |||| | | ||| ||
Sbjct 1721 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 1662
Query 77295 CAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT 77354
| | | | || | |||||||||| | ||||| | || | |||
Sbjct 1661 TATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGA 1602
Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414
||||| | | | || ||||| ||||| || | || || |||| ||| || |||||
Sbjct 1601 GATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAA 1542
Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474
|| | | |||||| ||||| ||||| | |||| || || | |||||| ||||
Sbjct 1541 GCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCA 1482
Query 77475 AACGGATAATGT-AAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533
|| || |||| | || | || ||||||||||| || || || || |||| | |||| ||
Sbjct 1481 AATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGG 1423
Query 77534 TCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAAT 77593
||| | |||| |||| || | | || | || |||||| || || | || || ||
Sbjct 1422 TCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTATCGATGAT 1363
Query 77594 TTTATTGAGATTTCTA---ACAAC-----TACTTTAA--CCACGTCCTTTAGTTTAAGAA 77643
|||||| | ||| || ||||| || ||| | || || |||| | |
Sbjct 1362 TTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTT--ATAC 1305
Query 77644 AATCAAATCTT-CCATC---TATAACAAA--CATGTTCAAAGCTATAGATGCTAGATTAC 77697
| || |||| |||| | |||||| || | ||| || | | |||| |||||
Sbjct 1304 CAACAGTTCTTGTCATCACTTTCAACAAATGCAGG--CAATGCAACACTAGCTAAATTAC 1247
Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757
|||||||| || | || | ||||| | || || |||| ||| | |||
Sbjct 1246 AAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATT 1187
Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAA 77817
||||| |||| ||||||||| || || || || |||| |||||||| | || |
Sbjct 1186 TGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGA 1127
Query 77818 ACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTT 77875
| || || || |||||| | || | ||| | || || | ||| | ||| | |||||
Sbjct 1126 AAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATA--ACTTTTGTGCTTT 1069
Query 77876 TATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATC 77935
|| | || || | ||||||||||||| ||||||| || ||||||||
Sbjct 1068 AATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATC 1009
Query 77936 TCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972
|| | |||||| ||| ||||| |||| | |||
Sbjct 1008 ACCATATACATCACTCAAACCAGGTGCTTCACTAGGG 972
>seq4829
Length=1098
Score = 235 bits (260), Expect = 8e-57
Identities = 558/836 (67%), Gaps = 18/836 (2%)
Strand=Plus/Minus
Query 47901 GATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAAT 47960
|| || || |||||||| || |||||||| | | || | |||| | | ||||||
Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014
Query 47961 TCTGAAATCAGT---CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTC 48017
| ||||||| ||||||||||| || || | ||| ||||| || ||||
Sbjct 1013 GC---AATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTC 957
Query 48018 ATTCCTATAAGTTTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGC 48076
|| || | | || || ||||| || || || ||| | ||||| ||| ||| || ||
Sbjct 956 ATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGC 898
Query 48077 ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACAT 48136
|| || || | | || ||| || ||| | || ||||||| ||| |
Sbjct 897 TTCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAG 838
Query 48137 TAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 48196
||||| |||||||| ||| | |||||||||||||| ||| | ||||| || || ||
Sbjct 837 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 778
Query 48197 GAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAA 48256
| ||| ||||| | || | ||||| | ||| || || | || || || ||||| ||
Sbjct 777 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 718
Query 48257 GAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTG 48316
||| || ||||| || || |||||||| | |||||| | | || || || |
Sbjct 717 GAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATC 658
Query 48317 T---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGC 48373
| ||||| | ||||| || ||||| | ||| | ||| || |||||||| || ||
Sbjct 657 TGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGC 598
Query 48374 ATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATA 48433
||| || | || | |||| || |||||| | ||||||||| || || | | |||
Sbjct 597 ATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATA 538
Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493
|||| || ||||| ||||| || || || || || || |||||| | || ||||
Sbjct 537 AGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGG 478
Query 48494 GATCTGTACCTCCGT--ACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTA 48551
|| || || || | | ||| || ||| | ||||| ||||| ||||| |||||| |
Sbjct 477 AATTTGAACATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAA 420
Query 48552 GCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTA 48608
|||||||| || |||| || | ||| || || |||| || ||| | ||
Sbjct 419 GCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTG 360
Query 48609 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCT 48668
||||| |||| | |||||| || | ||| | ||| || || ||||| || ||||| |||
Sbjct 359 TTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCT 300
Query 48669 GCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724
|| || || ||||| | ||| || || || | |||||| || | |||||| ||
Sbjct 299 GCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244
>seq5463
Length=2400
Score = 102 bits (112), Expect = 1e-16
Identities = 180/260 (69%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070
||| || | ||| || ||||||||||||||||||| ||||| | ||| |||||| ||
Sbjct 1035 CATGAACATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTT 976
Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130
|| |||||| | | || |||||| || | || |||| ||||||||| |||| |||
Sbjct 975 CCCATGATTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATA 916
Query 78131 TATTGCCATA-ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189
|| ||| | | | || |||| ||| || || ||||| || | |||| || || ||
Sbjct 915 TA-TGCAAAATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAAT 857
Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAAC 78249
| | ||| | ||||| || || | |||| || | ||||| | || || |||
Sbjct 856 TGAATACTTTTAACATAGGGATTAAACCGGATGAAATCCCATTACTACCGTTGATGTAAG 797
Query 78250 TTCCACTTGCGCGAATATTA 78269
| ||||| || | ||||||
Sbjct 796 TACCACTGGCTCTTATATTA 777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694618540712320
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