Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4829 298 8e-76 seq5022 251 1e-61 seq5463 96.9 5e-15 >seq4829 Length=1098 Score = 298 bits (330), Expect = 8e-76 Identities = 572/836 (68%), Gaps = 18/836 (2%) Strand=Plus/Minus Query 46390 GATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAAT 46449 || || || |||||||| || || ||||| ||||| | || | |||| | | |||||| Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014 Query 46450 TCTGAAATCAGT---CTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTC 46506 | ||||||| ||||||||||| || || | |||| ||||| || |||| Sbjct 1013 GC---AATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTC 957 Query 46507 ATTCCTATGAGTTTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGC 46565 || || | | ||||| ||||| || || || ||| | ||||| ||||||| || || Sbjct 956 ATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGC 898 Query 46566 ATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACAT 46625 || | || || | | || ||| || ||| | ||| |||||||| ||| | Sbjct 897 TTCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAG 838 Query 46626 TAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 46685 ||||| |||||||| ||| | ||||||||||||| ||| | ||||| || || || Sbjct 837 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 778 Query 46686 GAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAA 46745 | || ||||| | || | |||||| | ||| || || | || || || ||||| || Sbjct 777 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 718 Query 46746 GAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG 46805 ||| || ||||| ||||| || ||||| || | |||||| | | ||||| |||| Sbjct 717 GAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATC 658 Query 46806 ---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGC 46862 |||||| || |||||| || ||||||| ||| | ||| || |||||||| || || Sbjct 657 TGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGC 598 Query 46863 ATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATA 46922 ||| || | || | |||| | |||||| | || ||||| || || | | ||| Sbjct 597 ATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATA 538 Query 46923 CATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 46982 |||| |||||||||||||| || || || || || || |||||| | || || | Sbjct 537 AGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGG 478 Query 46983 AATCTGTAC--CTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTA 47040 ||| || || | || | ||| || ||| ||||| ||||| ||||| |||||| | Sbjct 477 AATTTGAACATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAA 420 Query 47041 GCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTA 47097 |||||||| || || | || | ||| || || |||||| ||| | || Sbjct 419 GCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTG 360 Query 47098 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCT 47157 ||||| |||| | |||||| || | ||| | ||| || || |||||||| || || ||| Sbjct 359 TTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCT 300 Query 47158 GCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCT 47213 || || || ||||| | ||| || || |||| | ||| ||||| | |||||| || Sbjct 299 GCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 >seq5022 Length=2556 Score = 251 bits (278), Expect = 1e-61 Identities = 538/795 (68%), Gaps = 8/795 (1%) Strand=Plus/Minus Query 76691 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTA 76750 || || | |||||| |||||||| || || | ||||| || | |||| |||| |||| Sbjct 932 AAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTA 873 Query 76751 TTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATG 76810 ||||| || || || | ||| || |||||||||||| | || || | |||||||||||| Sbjct 872 TTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATC 813 Query 76811 CCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATA 76870 || || ||||||||||| || || | ||||||| ||| || | ||||||| ||| Sbjct 812 CCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATA 753 Query 76871 GATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAG 76930 || || || || || || |||| || || | |||||| |||||| || |||||| Sbjct 752 TGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAG 693 Query 76931 ATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGA 76990 || || || || ||| ||| |||| || | ||||| ||||||||||| Sbjct 692 ATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTT 633 Query 76991 ACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGA 77050 ||| || | ||| || | || ||||| ||||| ||||| | | | || | | | Sbjct 632 GGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAA 573 Query 77051 TTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATC 77110 || || ||||||||||| | || ||||| |||||| || || || || | ||| Sbjct 572 TTATAAGTTTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATT 513 Query 77111 AACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATT--TTT 77168 | | ||| || || | ||| || ||||| ||||||| | || ||| || | | ||| Sbjct 512 ATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAA-AAG-ATAACTCCTTT 455 Query 77169 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAAT 77228 | || ||||| |||||||||||||| || |||||||| || ||| ||| | || Sbjct 454 CTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCAT 395 Query 77229 TTAGTTTGTCCTTATATTTGGTAACAATAT-CCATGACAGTGGTAGAAATAATTGGAGAT 77287 || | | | | || ||| ||||| | ||| | | | ||||| ||||||| Sbjct 394 CTAATATATTCGCATTTTTTTGGACAATTTCCCAAGTC-TCCTTTGAAATCATTGGAGCA 336 Query 77288 CGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGt 77347 || | ||||||||||||| || ||| || ||| | | | || || ||| Sbjct 335 GGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTC 276 Query 77348 ttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCA 77407 || |||||| ||| |||| || || | || | ||||||||| | | ||||| || Sbjct 275 TTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCT 216 Query 77408 GGATGTTGTGTAGTGCAGGT-GGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGT 77466 ||||| || || || | || || |||| || |||||| |||||||||| | ||| Sbjct 215 GGATGGATAGTTGT-CATATAAGCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGT 157 Query 77467 AGTAACTCCGTTATA 77481 ||||| || | ||| Sbjct 156 TGTAACACCATCATA 142 Score = 206 bits (228), Expect = 4e-48 Identities = 750/1163 (64%), Gaps = 27/1163 (2%) Strand=Plus/Minus Query 75413 AGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGT 75472 || || |||||||| || || || ||| |||| || |||||||||||| |||| | Sbjct 2141 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 2082 Query 75473 TTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCT 75532 || | |||| | ||| || ||||| || || ||||| | | | || Sbjct 2081 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 2022 Query 75533 CCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAA 75592 ||||||||||| ||||| | ||||| |||||||| | || ||||| | ||| || | Sbjct 2021 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 1962 Query 75593 ACTTGTTTGATATCATCTGGAAGATTTG-TA--TTTTGAATGGATCCGCCATCAGATATA 75649 | | ||||| || | |||| ||| | || || ||||| || || ||| || || Sbjct 1961 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 1902 Query 75650 ATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGA 75709 || || || || ||||||||| | | | || |||| |||| | | || | Sbjct 1901 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAA 1842 Query 75710 GGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATAT 75769 || || ||||| || ||||| || | || ||||||| || ||||||||| || || Sbjct 1841 GGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 1782 Query 75770 GGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCC 75829 ||||| | |||| |||| || | |||||||| ||||||||||||||||| ||||| Sbjct 1781 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 1722 Query 75830 ACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCC 75889 || | || |||||| | ||||| | ||||||| || |||| | | ||| || Sbjct 1721 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 1662 Query 75890 CAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATAT 75949 | | | | ||| | |||| ||||| | ||||| | || | | ||| Sbjct 1661 TATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGA 1602 Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 ||||| | | | || || || | || ||| | || || ||| ||| ||||| || Sbjct 1601 GATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAA 1542 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCA 76069 ||| | | |||||| ||||| ||||| | |||| || || | ||||| | |||| Sbjct 1541 GCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCA 1482 Query 76070 AAAGGATAATGT-AAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGG 76128 || || |||| | || | || || |||||||| | || || || |||| | |||| || Sbjct 1481 AATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGG 1423 Query 76129 TCTATGTCTCTTATTGGA---AATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTAT 76185 ||| | |||| |||| || || ||| ||| || ||| || || || |||| || Sbjct 1422 TCTGTTTCTCATATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGAT 1366 Query 76186 AATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAA-----A 76240 |||||||| | ||| | || || || | || | || || ||| | Sbjct 1365 GATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATA 1306 Query 76241 TCAAATTTTC----CAT--CTATC-ACAAACATATTAAGAGCTATAGATGCTAGATTACA 76293 ||| ||| ||| || || ||||| | | || | | |||| |||||| Sbjct 1305 CCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACA 1246 Query 76294 AACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTT 76353 ||| ||| || | || | ||||| | || || ||||| ||| | | || Sbjct 1245 AACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTT 1186 Query 76354 GATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAA 76413 |||| || | ||||||||| || || |||||||||| |||||||| | | || Sbjct 1185 GATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAA 1126 Query 76414 CGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTT 76471 || || ||||||||| | || | ||| | || || | ||| | ||| | ||||| Sbjct 1125 AGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATA--ACTTTTGTGCTTTA 1068 Query 76472 ATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCT 76531 ||| | || || ||||||||||||| |||||||| || |||||||| Sbjct 1067 ATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCA 1008 Query 76532 CCCCAAACATCATCCAAACCAGG 76554 || | |||||| ||||||||| Sbjct 1007 CCATATACATCACTCAAACCAGG 985 >seq5463 Length=2400 Score = 96.9 bits (106), Expect = 5e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 ||| || | ||| || ||||||||||||||||||| ||||| | ||| |||||| || Sbjct 1035 CATGAACATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTT 976 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 || |||||| | | || || || || | || |||| ||||||||| |||| ||| Sbjct 975 CCCATGATTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATA 916 Query 76726 TATCGCCATA-ACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTAT 76784 ||| || | | |||| |||| ||| || || ||||| || | |||| ||||| || Sbjct 915 TAT-GCAAAATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAAT 857 Query 76785 TATAAACTCTCAACATTGGAAT 76806 | | ||| | ||||| || || Sbjct 856 TGAATACTTTTAACATAGGGAT 835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712882819196160