Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2706 143 6e-29
seq2598 143 6e-29
seq730 140 7e-28
seq1062 96.9 7e-15
>seq2706
Length=450
Score = 143 bits (158), Expect = 6e-29
Identities = 147/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||||| | || | ||||| |||| ||| || || |||||
Sbjct 192 TTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 133
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| | | |||||||||| |||||||| |||||||||||||| || | || || |
Sbjct 132 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATT 73
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||||||||| || | |||||||| | || || |||||||| || ||||| |||||
Sbjct 72 GTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAAC 13
Query 283088 GAATATCTGCAT 283099
|| || |||||
Sbjct 12 AAAAATTTGCAT 1
>seq2598
Length=450
Score = 143 bits (158), Expect = 6e-29
Identities = 147/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||||| | || | ||||| |||| ||| || || |||||
Sbjct 192 TTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 133
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| | | |||||||||| |||||||| |||||||||||||| || | || || |
Sbjct 132 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATT 73
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||||||||| || | |||||||| | || || |||||||| || ||||| |||||
Sbjct 72 GTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAAC 13
Query 283088 GAATATCTGCAT 283099
|| || |||||
Sbjct 12 AAAAATTTGCAT 1
>seq730
Length=387
Score = 140 bits (154), Expect = 7e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | | || | ||||| |||| ||| || || |||||
Sbjct 192 TTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 133
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| | | |||||||||| |||||||| ||||| |||||||||||| || || |
Sbjct 132 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATT 73
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| ||||| |||| ||| ||||| | || || |||||||| || || ||||| ||
Sbjct 72 GTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGAC 13
Query 283088 GAATATCTGCAT 283099
|| || |||||
Sbjct 12 AAAAATTTGCAT 1
>seq1062
Length=3138
Score = 96.9 bits (106), Expect = 7e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088
||||| ||||| | |||||||| |||| || ||||| | || ||||| |||||||||
Sbjct 1454 GGGAAACCTTCAACTTGACCGTTAGCAATAGCTCTCATTAAGGTGGACTTACCAGCACCA 1395
Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148
|| || || || | |||||| | | || |||| || | || | || ||||| |
Sbjct 1394 TTTGGACCACATAAACCATATCTTCTACCTCTCTTTAGTCTTAATTGAGTCTTGTTTAAC 1335
Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| ||||||| ||||||| || || ||||| ||||| | ||| | ||| || ||
Sbjct 1334 AAAATCTTAGCACCATAAGCAAGGGAGAATTCACAGTTACATAAGTCTTCACC 1282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046661575129352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |