Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq24 398 9e-106 seq10 329 4e-85 >seq24 Length=140564 Score = 398 bits (440), Expect = 9e-106 Identities = 1383/2140 (65%), Gaps = 41/2140 (2%) Strand=Plus/Minus Query 52801 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 52860 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 88839 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 88780 Query 52861 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATC 52920 || || || |||| || || |||||||| |||| ||| | |||| Sbjct 88779 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 88720 Query 52921 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 52980 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 88719 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 88660 Query 52981 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 53039 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 88659 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 88601 Query 53040 CTGGAAGGTTTG-TA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCT 53096 |||| || | || |||||||| || ||| |||| || || || || || Sbjct 88600 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 88541 Query 53097 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 53156 ||||||||| | | | || ||| |||| | | || || || || | || | Sbjct 88540 AATCATTCCAGAGTCCCATTTCAACCAAATCTCTCAACATATAAGGGTTGACAATCTGGA 88481 Query 53157 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 53216 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 88480 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 88421 Query 53217 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 53276 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 88420 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 88361 Query 53277 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 53334 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 88360 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 88301 Query 53335 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 53394 | || ||||| | ||| | || |||||| || | || Sbjct 88300 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 88243 Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454 || |||||||| ||| || | || |||| ||| ||||| || ||| | | |||||| Sbjct 88242 CTCATATGGTCCATCCCTCATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 88183 Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT-A 53513 |||||| || || | |||| || || | |||||| | ||||||||| |||| | | Sbjct 88182 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 88124 Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 | | || || || ||||| || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 88123 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 88064 Query 53574 TAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGT 53630 | || || ||| ||| || |||||| || || |||| || |||||||| | || Sbjct 88063 TTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 88007 Query 53631 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATTGT 53680 || | | || ||||| | ||| |||| |||| | || |||| Sbjct 88006 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTTGT 87947 Query 53681 CCATCTATTACAA-ACATGTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTCA 53737 | ||| || ||| | ||| |||||||| | || | ||||||||| ||| || Sbjct 87946 C-ATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCC 87888 Query 53738 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 53797 | || | ||||| | || ||| ||| | ||| | | ||||| || ||| Sbjct 87887 TCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAA 87828 Query 53798 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTT 53857 |||||||||||| || |||||||| ||||||||||| | ||||| || ||||||||| Sbjct 87827 TTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTT 87768 Query 53858 TCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTAT 53917 ||| | || | ||||| |||| | ||| | | || || ||| | || | Sbjct 87767 TCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCT 87708 Query 53918 CTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977 || ||||||||| ||| ||||| ||| || || || || || | |||| | Sbjct 87707 CTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTC 87648 Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 || ||||| |||| || | | || | ||| ||| | | | || |||| || | Sbjct 87647 AAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCC 87588 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 ||||| | |||||||||||| | ||| |||| |||||| | |||| ||| || || Sbjct 87587 ATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTA 87528 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || || || | | ||| | || | | |||||| |||||||| || || | ||| Sbjct 87527 CCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAA--TAT 87470 Query 54158 ATGGTCATAACTC--CAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 54215 || || ||| | |||| | ||| || || || || || | || || || ||||||| Sbjct 87469 ATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTAT 87410 Query 54216 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 54275 || | || || | |||||||||||| |||||||||| |||||| || |||| ||||| Sbjct 87409 TAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAG 87350 Query 54276 TTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTA 54335 ||| | | | ||||||| || || || || || || || |||| || || | Sbjct 87349 AACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCA 87290 Query 54336 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 54395 | || ||| ||| || ||||||||||| || || || ||| ||| |||| || || Sbjct 87289 AAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTA 87230 Query 54396 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 54455 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| | Sbjct 87229 AGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCAT 87170 Query 54456 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATT 54515 | || || | | | || | | ||| || || || ||| | || || ||||| Sbjct 87169 GTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCAC 87110 Query 54516 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 54575 |||||| || || || || | ||||| | || || || |||||| | ||||| | Sbjct 87109 CATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCAGCAATCTTACCAT 87050 Query 54576 TTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 54635 ||||| | | | || |||| || ||||| |||||||||||||| || |||| Sbjct 87049 TTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGT 86990 Query 54636 CTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGG 54695 ||| || ||| ||| | | | | ||| | || ||| | || | ||| | Sbjct 86989 CTCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAG 86930 Query 54696 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755 | ||||||| || |||| | |||| ||||||||||||| | ||| || ||| | Sbjct 86929 TCTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTT 86870 Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 || | |||||| ||| || |||||| || |||| ||||| | || | || Sbjct 86869 GATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTC 86810 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGG 54872 |||| || | | |||||||| ||||| | | ||| || || || || |||| | Sbjct 86809 TAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAG 86753 Query 54873 CTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912 | | | | | || ||||| || ||||| || |||| ||| Sbjct 86752 CAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 86713 >seq10 Length=365393 Score = 329 bits (364), Expect = 4e-85 Identities = 607/884 (69%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| || || | ||||||||||| || |||||||| | | || || || Sbjct 99463 TTTTGGTAGTCTGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 99522 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 ||||| || ||| ||||||| ||||| | || | ||| | | || ||| || | Sbjct 99523 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 99582 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023 | ||||||||| |||||||| | ||| ||||| || |||||| || | | Sbjct 99583 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 99642 Query 24024 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 || || || || || |||| ||| | |||| ||||||| || || || || || || Sbjct 99643 TTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTCGGTAATGAT 99701 Query 24083 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 24142 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 99702 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 99761 Query 24143 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 24202 |||| |||| ||| || ||||||| ||| | |||||||| ||||| | || ||||| Sbjct 99762 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 99821 Query 24203 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 24262 | || | |||||| | ||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct 99822 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 99881 Query 24263 TACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT---ATCCACTT 24319 || || ||||| || | | || ||| || | || | || | ||||| || Sbjct 99882 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTT 99941 Query 24320 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 24379 | |||||| |||||||| | || | ||| || ||||| || || ||||| || | | Sbjct 99942 TAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 100001 Query 24380 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 24439 | |||| || |||||| | || ||||||||||| | | ||| |||||||||| Sbjct 100002 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 100061 Query 24440 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT- 24498 ||||||||| || ||||| || || ||||||||| ||||||| | ||| || || | Sbjct 100062 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 100121 Query 24499 -CTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 24557 || | ||| || || ||||||||||||| ||||| || ||| || ||||| ||| Sbjct 100122 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 100179 Query 24558 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 24614 || | || | || || || |||| | | | | | || |||||||||| Sbjct 100180 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 100239 Query 24615 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 24674 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || ||| Sbjct 100240 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 100299 Query 24675 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 || | ||| || || ||||| | |||||||| | |||||| || Sbjct 100300 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593719670404800