Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq2 98.7 8e-16
seq115 93.3 4e-14
seq11 93.3 4e-14
seq1 86.0 5e-12
>seq2
Length=717657
Score = 98.7 bits (108), Expect = 8e-16
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| || |||||||| ||||| ||||| | | ||| | || || | || || ||
Sbjct 277383 GTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCT 277442
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | |||||||| || ||||| || | |||||||| || ||||||||| ||
Sbjct 277443 GCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTG 277502
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || ||| | || ||| | |||||||||||| |||||||| ||
Sbjct 277503 ACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTC 277562
Query 21159 TTGACAAATATTTGCATTTTGA 21180
|||||||| |||||||| ||||
Sbjct 277563 TTGACAAAAATTTGCATCTTGA 277584
>seq115
Length=8510
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
||| || |||||||||||||| ||||| | || ||| | || || | || || ||
Sbjct 1908 AGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACC 1849
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
||| | |||||||| || ||||| || | ||||||||||| ||| || ||
Sbjct 1848 TGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTT 1789
Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157
|| | | ||| ||| ||| | ||| ||| | |||||| ||||| || ||||| ||
Sbjct 1788 GACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGT 1729
Query 21158 TTTGACAAATATTTGCATTTT 21178
||| ||||| |||||||| ||
Sbjct 1728 TTTAACAAAAATTTGCATCTT 1708
>seq11
Length=336598
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
||| || |||||||||||||| ||||| | || ||| | || || | || || ||
Sbjct 4950 AGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACC 5009
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
||| | |||||||| || ||||| || | ||||||||||| ||| || ||
Sbjct 5010 TGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTT 5069
Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157
|| | | ||| ||| ||| | ||| ||| | |||||| ||||| || ||||| ||
Sbjct 5070 GACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGT 5129
Query 21158 TTTGACAAATATTTGCATTTT 21178
||| ||||| |||||||| ||
Sbjct 5130 TTTAACAAAAATTTGCATCTT 5150
>seq1
Length=782669
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| |||||||| || ||||| ||||||| || || ||||||| || ||||| ||
Sbjct 231399 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCA 231458
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| ||||||||||||||||||| || | || |||||||| |||||| ||
Sbjct 231459 GCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 231518
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | | || || | |||| |||| || || || ||||| |||| ||
Sbjct 231519 ACATTGTCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTC 231578
Query 21159 TTGACAAATATTTGCAT 21175
|||||||| || |||||
Sbjct 231579 TTGACAAAGATCTGCAT 231595
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| |||||||| || ||||| ||||||| || || ||||||| || ||||| ||
Sbjct 231627 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCA 231686
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| ||||||||||||||||||| || | || |||||||| |||||| ||
Sbjct 231687 GCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 231746
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | || || | |||| |||| || || || ||||| |||| ||
Sbjct 231747 ACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTC 231806
Query 21159 TTGACAAATATTTGCATTT 21177
|||||||| || |||||||
Sbjct 231807 TTGACAAAGATCTGCATTT 231825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422257861966160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |