Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=782669 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 40688 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA 40747 ||||||| || || || || || || || |||||||| ||||| | || || || | Sbjct 231825 AAATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCAT 231766 Query 40748 CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||||| | | | | ||||| || || | ||||| ||||| || || | |||| Sbjct 231765 CCGACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACC 231706 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| |||| || | ||| || ||||| || || |||| | || ||| ||||||| Sbjct 231705 AGCAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACA 231646 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||| | ||||| || | || ||| | ||||| || || Sbjct 231645 ACATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 231597 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || |||||||| ||||| | || || || | || Sbjct 231367 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231308 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| || || | |||||| Sbjct 231307 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231248 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| || | ||| || ||||| || || |||| | || ||| ||||||||| Sbjct 231247 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231188 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | ||||| || | || ||| | ||||| || || Sbjct 231187 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 231141 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || |||||||| ||||| | || || || | || Sbjct 231595 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231536 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| || || | |||||| Sbjct 231535 GACACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231476 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| || | ||| || ||||| || || |||| | || ||| ||||||||| Sbjct 231475 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231416 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | ||||| || | || ||| | ||||| || || Sbjct 231415 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 231369 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || |||||||| ||||| | || || || | || Sbjct 231139 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231080 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| || || | |||||| Sbjct 231079 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231020 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| || | ||| || ||||| || || |||| | || ||| ||||||||| Sbjct 231019 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 230960 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | ||||| || | || ||| | || || || || Sbjct 230959 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTAAGAGGTGG 230913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217525537600