Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 7e-17
seq115 91.5 1e-13
seq11 91.5 1e-13
>seq1
Length=782669
Score = 102 bits (112), Expect = 7e-17
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || | ||||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 230912 ACCACCTCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG- 230970
Query 118571 CATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627
| |||| | || ||||| || ||||| |||||| | || || | |||||| || ||
Sbjct 230971 -AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGG 231028
Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTC 118687
|| || ||||||||||| || || || || | || | |||||| | |||
Sbjct 231029 TGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTC 231088
Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 231089 CACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231139
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 231139 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 231198
Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626
| |||| | || ||||| || ||||| |||||| | || || | |||||| || |
Sbjct 231199 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 231255
Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686
| || || ||||||||||| || || || || | || | |||||| | ||
Sbjct 231256 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACT 231315
Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 231316 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231367
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 231367 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 231426
Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626
| |||| | || ||||| || ||||| |||||| | || || | |||||| || |
Sbjct 231427 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 231483
Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686
| || || ||||||||||| || || || || | || | |||||| | ||
Sbjct 231484 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGATGACT 231543
Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 231544 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231595
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 231595 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 231654
Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626
| |||| | || ||||| || ||||| |||||| | || || | |||||| || |
Sbjct 231655 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 231711
Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686
| || || ||||||||||| || || || || | || | |||||| | ||
Sbjct 231712 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACT 231771
Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 231772 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231823
>seq115
Length=8510
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || | ||||||||| || ||||| | ||||| || |||||||||||||| ||
Sbjct 1938 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGA 1879
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||| | ||| || | || || || || |||| || | || || || || ||
Sbjct 1878 CAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGG 1819
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||||||| ||||| || || | |||| ||||| | ||||||
Sbjct 1818 AATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGAC 1759
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | || || || || | |||||| |||||||| |||||
Sbjct 1758 TTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1711
>seq11
Length=336598
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || | ||||||||| || ||||| | ||||| || |||||||||||||| ||
Sbjct 4920 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGA 4979
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||| | ||| || | || || || || |||| || | || || || || ||
Sbjct 4980 CAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGG 5039
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||||||| ||||| || || | |||| ||||| | ||||||
Sbjct 5040 AATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGAC 5099
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | || || || || | |||||| |||||||| |||||
Sbjct 5100 TTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 5147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829025299920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |