Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-17 seq115 91.5 1e-13 seq11 91.5 1e-13 >seq1 Length=782669 Score = 102 bits (112), Expect = 7e-17 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || | ||||||||| |||||||||| || ||||| || || |||||||| || Sbjct 230912 ACCACCTCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG- 230970 Query 118571 CATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627 | |||| | || ||||| || ||||| |||||| | || || | |||||| || || Sbjct 230971 -AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGG 231028 Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTC 118687 || || ||||||||||| || || || || | || | |||||| | ||| Sbjct 231029 TGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTC 231088 Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| | || | |||||||| || || || || ||||| |||||||| Sbjct 231089 CACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231139 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| |||||||||| || ||||| || || |||||||| || Sbjct 231139 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 231198 Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626 | |||| | || ||||| || ||||| |||||| | || || | |||||| || | Sbjct 231199 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 231255 Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686 | || || ||||||||||| || || || || | || | |||||| | || Sbjct 231256 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACT 231315 Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||| | || | |||||||| || || || || ||||| |||||||| Sbjct 231316 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231367 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| |||||||||| || ||||| || || |||||||| || Sbjct 231367 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 231426 Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626 | |||| | || ||||| || ||||| |||||| | || || | |||||| || | Sbjct 231427 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 231483 Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686 | || || ||||||||||| || || || || | || | |||||| | || Sbjct 231484 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGATGACT 231543 Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||| | || | |||||||| || || || || ||||| |||||||| Sbjct 231544 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231595 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| |||||||||| || ||||| || || |||||||| || Sbjct 231595 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 231654 Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626 | |||| | || ||||| || ||||| |||||| | || || | |||||| || | Sbjct 231655 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 231711 Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686 | || || ||||||||||| || || || || | || | |||||| | || Sbjct 231712 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACT 231771 Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||| | || | |||||||| || || || || ||||| |||||||| Sbjct 231772 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231823 >seq115 Length=8510 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || | ||||||||| || ||||| | ||||| || |||||||||||||| || Sbjct 1938 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGA 1879 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||| | ||| || | || || || || |||| || | || || || || || Sbjct 1878 CAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGG 1819 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||||||| ||||| || || | |||| ||||| | |||||| Sbjct 1818 AATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGAC 1759 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | || || || || | |||||| |||||||| ||||| Sbjct 1758 TTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1711 >seq11 Length=336598 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || | ||||||||| || ||||| | ||||| || |||||||||||||| || Sbjct 4920 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGA 4979 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||| | ||| || | || || || || |||| || | || || || || || Sbjct 4980 CAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGG 5039 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||||||| ||||| || || | |||| ||||| | |||||| Sbjct 5040 AATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGAC 5099 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | || || || || | |||||| |||||||| ||||| Sbjct 5100 TTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 5147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829025299920