Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq10 297 2e-75
>seq10
Length=365393
Score = 297 bits (328), Expect = 2e-75
Identities = 600/876 (68%), Gaps = 27/876 (3%)
Strand=Plus/Plus
Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018
||||||||||| || || |||||||| || | | ||||| || |||||||| || ||
Sbjct 99478 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 99537
Query 16019 GGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAACAATAATCTATCCGCC 16075
|||||| | ||| | |||| || || || || ||| | | || || |||||| ||
Sbjct 99538 GGATTTGT--AACG-TCGTATACCTTTTCACAACCTAATGCAATCAGTAGTCTATCTGCA 99594
Query 16076 ACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATT 16135
||||| || | |||||| ||| ||||| ||||| || | || || ||||| |
Sbjct 99595 ACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGG 99654
Query 16136 GCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACA 16195
|| || || || | | ||||| |||| ||| ||||| | || || | ||| || |
Sbjct 99655 GCGTCAGTGAAGTATCTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATT 99714
Query 16196 CTATTTAACGGAGGGTTTAAT--AAGTGTTTAAACATTATACAAGCAAAATCACAATGCA 16253
| || | | |||| | | || ||| ||| | | |||||||||||| ||| |
Sbjct 99715 TT-TTCGTCTG-GGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTA 99772
Query 16254 ATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTT 16313
| ||||| || |||| || | |||||| || || || | ||||||||| | |||| |
Sbjct 99773 AACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCT 99832
Query 16314 TTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAA 16373
|||| | ||| || || | |||||||||||||| ||||| ||||||||||| || ||||
Sbjct 99833 TTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAA 99892
Query 16374 ATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaat 16433
|||| ||||| | ||| | || | || |||| | | ||||||||| |||||| |
Sbjct 99893 ATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATT 99952
Query 16434 ttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtt--tttttC 16491
|| |||| || | ||| || | || |||||||| ||| || |||| ||| |
Sbjct 99953 CGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAAT-AAGAATTCACTTTCC 100011
Query 16492 TTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTC 16551
|||| |||| || |||||||| || | |||| ||| |||| |||||||| || ||
Sbjct 100012 TTTG-GATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTC 100070
Query 16552 CATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAA 16611
||| || || || ||||| || ||| |||| || | ||||| || ||| | ||
Sbjct 100071 CATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAA 100130
Query 16612 CCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA---- 16667
| || |||| ||||| || ||||| ||||| ||| ||||| ||||| || |
Sbjct 100131 ATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCT 100190
Query 16668 TGTGTTTAATAAAAttt--ttttCGTT--ATCTGAAAGTTTTAACCAGTCAGAAAAATCT 16723
|| | || || ||| |||||||| |||| | ||| ||| ||| ||||||
Sbjct 100191 TGAAATGAAGAATCTTTCATTTTCGTTCAATCT-ATTGTT----CCAATCATGCAAATCT 100245
Query 16724 TTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTC 16783
|| || | ||| | || || ||||||| ||||| || | ||||| || ||||||| |
Sbjct 100246 TTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGC 100305
Query 16784 CATATGTCTTCGTAAACAATAGGAAACACAACATAC 16819
|| || || | || || ||||| | |||| ||
Sbjct 100306 CAAATTTCGTGATACTTGATTGGAAAGAGAACAAAC 100341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462510496836000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |