Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq10 297 2e-75 >seq10 Length=365393 Score = 297 bits (328), Expect = 2e-75 Identities = 600/876 (68%), Gaps = 27/876 (3%) Strand=Plus/Plus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 ||||||||||| || || |||||||| || | | ||||| || |||||||| || || Sbjct 99478 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 99537 Query 16019 GGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAACAATAATCTATCCGCC 16075 |||||| | ||| | |||| || || || || ||| | | || || |||||| || Sbjct 99538 GGATTTGT--AACG-TCGTATACCTTTTCACAACCTAATGCAATCAGTAGTCTATCTGCA 99594 Query 16076 ACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATT 16135 ||||| || | |||||| ||| ||||| ||||| || | || || ||||| | Sbjct 99595 ACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGG 99654 Query 16136 GCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACA 16195 || || || || | | ||||| |||| ||| ||||| | || || | ||| || | Sbjct 99655 GCGTCAGTGAAGTATCTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATT 99714 Query 16196 CTATTTAACGGAGGGTTTAAT--AAGTGTTTAAACATTATACAAGCAAAATCACAATGCA 16253 | || | | |||| | | || ||| ||| | | |||||||||||| ||| | Sbjct 99715 TT-TTCGTCTG-GGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTA 99772 Query 16254 ATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTT 16313 | ||||| || |||| || | |||||| || || || | ||||||||| | |||| | Sbjct 99773 AACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCT 99832 Query 16314 TTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAA 16373 |||| | ||| || || | |||||||||||||| ||||| ||||||||||| || |||| Sbjct 99833 TTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAA 99892 Query 16374 ATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaat 16433 |||| ||||| | ||| | || | || |||| | | ||||||||| |||||| | Sbjct 99893 ATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATT 99952 Query 16434 ttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtt--tttttC 16491 || |||| || | ||| || | || |||||||| ||| || |||| ||| | Sbjct 99953 CGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAAT-AAGAATTCACTTTCC 100011 Query 16492 TTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTC 16551 |||| |||| || |||||||| || | |||| ||| |||| |||||||| || || Sbjct 100012 TTTG-GATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTC 100070 Query 16552 CATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAA 16611 ||| || || || ||||| || ||| |||| || | ||||| || ||| | || Sbjct 100071 CATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAA 100130 Query 16612 CCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA---- 16667 | || |||| ||||| || ||||| ||||| ||| ||||| ||||| || | Sbjct 100131 ATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCT 100190 Query 16668 TGTGTTTAATAAAAttt--ttttCGTT--ATCTGAAAGTTTTAACCAGTCAGAAAAATCT 16723 || | || || ||| |||||||| |||| | ||| ||| ||| |||||| Sbjct 100191 TGAAATGAAGAATCTTTCATTTTCGTTCAATCT-ATTGTT----CCAATCATGCAAATCT 100245 Query 16724 TTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTC 16783 || || | ||| | || || ||||||| ||||| || | ||||| || ||||||| | Sbjct 100246 TTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGC 100305 Query 16784 CATATGTCTTCGTAAACAATAGGAAACACAACATAC 16819 || || || | || || ||||| | |||| || Sbjct 100306 CAAATTTCGTGATACTTGATTGGAAAGAGAACAAAC 100341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462510496836000