Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq10 324 1e-83 >seq10 Length=365393 Score = 324 bits (358), Expect = 1e-83 Identities = 605/876 (69%), Gaps = 21/876 (2%) Strand=Plus/Plus Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987 ||||| ||||| || ||||| |||||||| | || || || || |||||||| || ||| Sbjct 99478 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 99537 Query 13988 GGATTTGTT--GACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAA 14045 |||||||| | | || || |||| |||||||||| | | | |||| |||||| |||| Sbjct 99538 GGATTTGTAACGTCGTATAC-CTTT-TCACAACCTAATGCAATCAGTAGTCTATCTGCAA 99595 Query 14046 TGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 14105 ||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| | Sbjct 99596 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 99655 Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165 | || || || ||||| ||| || || ||| | || || | | ||||| Sbjct 99656 CGTCAGTGAAGTATCTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 99715 Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 14225 | || | || || | |||| ||| | ||||| |||||||| ||| | | Sbjct 99716 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 99775 Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 | |||||||||| ||| || ||||| || || || || ||||||||||| |||| |||| Sbjct 99776 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 99835 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | ||||| || || | || ||||| || || ||||| || || ||||| |||||||| | Sbjct 99836 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 99895 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405 | | || | ||| ||||| |||| | ||| | | ||||||||| ||||||||| | Sbjct 99896 CCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGG 99955 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC-CTTCTCTTTA 14464 |||| || ||| | ||||||||||| ||||| ||||| ||| ||| |||| Sbjct 99956 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 100015 Query 14465 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATA 14524 | ||| ||||| |||||||| | ||| ||| |||| || || ||||||||||| Sbjct 100016 GATCTT-TGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 100074 Query 14525 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC---TGAGTAAAAT 14581 || || || ||||| |||||| |||| |||| ||| || || |||| |||| Sbjct 100075 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAG--AAAT 100132 Query 14582 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14641 | || | ||||||||||| |||||||||||| ||| ||||| || || | | || Sbjct 100133 -TCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTT 100191 Query 14642 TTAATAAAGTATTGCTCTTCATT---GCTGAGT---TTTTTCCAATCGGCTAAATCCTTA 14695 ||| ||| || || |||||| | | | | || |||||||| ||||| || Sbjct 100192 GAAATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTG 100248 Query 14696 GAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCAT 14755 || ||||| | ||| || | ||||| ||| || | || || || |||||| ||| Sbjct 100249 GAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAA 100308 Query 14756 ATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14791 ||||| | ||| || ||||| | ||||| ||| Sbjct 100309 ATTTCGTGATACTTGATTGGAAAGAGAACAAACCTT 100344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344032376800