Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq10 208 7e-49
seq24 131 1e-25
seq1 98.7 9e-16
seq2 95.1 1e-14
seq115 87.8 2e-12
seq11 87.8 2e-12
>seq10
Length=365393
Score = 208 bits (230), Expect = 7e-49
Identities = 602/911 (66%), Gaps = 33/911 (4%)
Strand=Plus/Minus
Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566
|| ||||||||||| | || || | || ||||| | ||||| || | ||||
Sbjct 100373 GAAGAACCACTTTTAAAGGAAAACAAGAGAAGGTTTGTTCTCTTTCCAATCAAGTATCAC 100314
Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626
|| |||||| | |||||||| |||||||||||||| || ||||| | || ||| | ||
Sbjct 100313 GAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTCTGGACTGCGGAGGAAATTGAT 100254
Query 57627 CTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATT 57683
|| || || ||| || |||||| || | || ||| ||| ||| || |||
Sbjct 100253 CTCTCCAAAGATTTGCATGATTGGAACAATAGATTGAACGAAAATGAAAGATTCTTCATT 100194
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
| || | ||||| || || || || |||||||| || || || ||||| || |
Sbjct 100193 TCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTG-- 100136
Query 57744 AGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801
||| |||| ||| || || ||| | | ||||| | ||| || || || || ||| |
Sbjct 100135 AGAATTTCTCAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTA 100076
Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-- 57859
|| |||||| | ||||| |||| ||||| || | || ||||| ||| | || ||
Sbjct 100075 TGATGGAAAACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATC 100016
Query 57860 CAACGACGAGAAACGTAGAC-TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGA 57918
||| | || || | | | | ||||| || || |||||||| || ||| | |
Sbjct 100015 CAA--AGGA-AAGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAA 99959
Query 57919 AGGCAGAGTGGTCAATCAAATGGAT-----AAAAAGCGCCACGGCCACGTTCGCCGAGAG 57973
|||| || ||| | | |||||||| | |||| || ||| || |||||
Sbjct 99958 AGGCCGAATGGGCTTTAAAATGGATTGCAGATAAAG-----ATGCATTGTTTGCAGAGAG 99904
Query 57974 GCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATT 58033
| | | || || || || || |||||||| ||||| || || ||||| | || ||
Sbjct 99903 GTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTT 99844
Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093
||| |||| || | || ||||||| || ||||||| ||||||| |||| | |
Sbjct 99843 CTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAG 99784
Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC 58153
|| || ||| | ||||| |||||||| || | | | | ||||||| | | |||
Sbjct 99783 AGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCT--TTTCACATTTGAACCATACC 99726
Query 58154 GACGCGGGATCGCATCTTGGAC--ATTATCACCGAGGCGGTCGCGATCGAAAATGAG-TT 58210
| | | | | ||| || || ||||| || || | || ||||| ||| |
Sbjct 99725 CCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAA-GAGATA 99667
Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270
|||| || |||||||| || | ||||||||||||| || |||||||||| ||||
Sbjct 99666 CTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTA 99607
Query 58271 CATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT-GATTG-GAGAGCGTCATTACAAC 58328
| ||||||||||| || ||||| || | | | | | ||| || | || ||| ||
Sbjct 99606 TGTCGAGTTTGTTGCAGATAGACTACTGATTGCATTAGGTTGTGAAAAGGT--ATACGAC 99549
Query 58329 ACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTC 58388
| |||||| || || |||||| | || || || | || || ||||||||||||
Sbjct 99548 GTTACAAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTC 99489
Query 58389 GaaaaaaaaGT 58399
||||| | |||
Sbjct 99488 GAAAAGAGAGT 99478
>seq24
Length=140564
Score = 131 bits (144), Expect = 1e-25
Identities = 401/620 (65%), Gaps = 0/620 (0%)
Strand=Plus/Minus
Query 23339 TTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCG 23398
|| ||||| | | |||||| | ||| || ||||||| ||| ||| | || | ||
Sbjct 87602 TTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCT 87543
Query 23399 CGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGC 23458
| | || ||||| ||| ||| || | | ||| | ||| || | | || | ||||
Sbjct 87542 CTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGC 87483
Query 23459 CACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAA 23518
|| ||||| | || | |||||||| || ||||| ||||| || || || || || ||
Sbjct 87482 CAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATAC 87423
Query 23519 CGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG 23578
| || ||||| || | || || | ||| || | | || ||||| | ||
Sbjct 87422 CTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTA 87363
Query 23579 CCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCC 23638
|| || | | ||||| ||| || || || || | || || || || || || |
Sbjct 87362 CCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCA 87303
Query 23639 GATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCT 23698
| ||| || |||| || |||| ||||| ||| || ||||| || || ||| || ||
Sbjct 87302 GTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCC 87243
Query 23699 TTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGT 23758
|| | || || |||||||| ||||||||||| | | || ||| | | ||| ||
Sbjct 87242 TTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGA 87183
Query 23759 GTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCA 23818
|| || || || || || || | || ||||| | ||| || || || || | | |
Sbjct 87182 GTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAA 87123
Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878
||||| || || || || ||||| | ||| || | ||| || | | ||| || || ||
Sbjct 87122 TCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCA 87063
Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938
| | || || ||| | || ||||| | || | ||||| || |||||||||
Sbjct 87062 GCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAG 87003
Query 23939 TCATAGTTAAAGTCACGATC 23958
| ||| || ||||| | |||
Sbjct 87002 TTATAATTGAAGTCTCTATC 86983
>seq1
Length=782669
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| || ||||||||||| ||||| | || || || | |||
Sbjct 231367 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231308
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| || || ||||||||| || | || || ||||||
Sbjct 231307 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231248
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || |||||||| ||||| | || ||| || ||| | || || |||
Sbjct 231247 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231188
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||| || || |||| | ||| |||| || ||||
Sbjct 231187 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGGTA 231139
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| || ||||||||||| ||||| | || || || | |||
Sbjct 231595 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231536
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| || || ||||||||| || | || || ||||||
Sbjct 231535 GACACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231476
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || |||||||| ||||| | || ||| || ||| | || || |||
Sbjct 231475 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231416
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||| || || |||| | ||| |||| || ||||
Sbjct 231415 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGGTA 231367
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| || ||||||||||| ||||| | || || || | |||
Sbjct 231823 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231764
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| || || ||||||||| || | || || ||||||
Sbjct 231763 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231704
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || |||||||| ||||| | || ||| || ||| | || || |||
Sbjct 231703 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231644
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||| || || |||| | ||| |||| || ||||
Sbjct 231643 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGGTA 231595
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| || ||||||||||| ||||| | || || || | |||
Sbjct 231139 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231080
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| || || ||||||||| || | || || ||||||
Sbjct 231079 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231020
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || |||||||| ||||| | || ||| || ||| | || || |||
Sbjct 231019 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 230960
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| || || || ||||| || || |||| | ||| | || || |||
Sbjct 230959 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTAAGAGGTGGT 230912
>seq2
Length=717657
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || ||||| | || || || || || ||| | || |||||| |
Sbjct 277582 AAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCT 277523
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | ||||| || | || || |||||||| | || || |||
Sbjct 277522 TCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGAC 277463
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | || || || || || || || || ||||| || ||| | ||| ||
Sbjct 277462 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTAC 277403
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| ||||| ||||| || ||||| |||| | ||| |||| || ||||
Sbjct 277402 AACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTA 277351
>seq115
Length=8510
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || || ||| | || || || || || ||| | || || || |
Sbjct 1708 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 1767
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | |||| | ||||| | ||| ||||||||||| | || || |||
Sbjct 1768 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 1827
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | || || || || || || || || ||||| || ||| || || ||
Sbjct 1828 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 1887
Query 31370 AACATTCAAAAAGAATCGACTCTTCA 31395
||||||||||| ||||| ||||||||
Sbjct 1888 AACATTCAAAAGGAATCTACTCTTCA 1913
>seq11
Length=336598
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || || ||| | || || || || || ||| | || || || |
Sbjct 5150 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 5091
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | |||| | ||||| | ||| ||||||||||| | || || |||
Sbjct 5090 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5031
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | || || || || || || || || ||||| || ||| || || ||
Sbjct 5030 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 4971
Query 31370 AACATTCAAAAAGAATCGACTCTTCA 31395
||||||||||| ||||| ||||||||
Sbjct 4970 AACATTCAAAAGGAATCTACTCTTCA 4945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764951259200
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