Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq24 459 3e-124 seq10 302 6e-77 >seq24 Length=140564 Score = 459 bits (508), Expect = 3e-124 Identities = 1444/2217 (65%), Gaps = 38/2217 (2%) Strand=Plus/Minus Query 62039 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 62098 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 88839 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 88780 Query 62099 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 62158 || || || |||| || || |||||||| ||||| ||| | |||| Sbjct 88779 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 88720 Query 62159 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62218 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 88719 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 88660 Query 62219 TTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62277 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 88659 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 88601 Query 62278 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCT 62334 |||| || | || |||||||| || ||| |||| || || || || || Sbjct 88600 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 88541 Query 62335 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGA 62394 ||||||||| | | | || ||| |||| | | || ||||| || | |||| Sbjct 88540 AATCATTCCAGAGTCCCATTTCAACCAAATCTCTCAACATATAAGGGTTGACAATCTGGA 88481 Query 62395 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCAT 62454 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 88480 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 88421 Query 62455 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62514 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 88420 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 88361 Query 62515 TAAGACCGTATGTTCTGATTTTATCTTTTAGATGT-TCCCAATTCCAAAGATCCGACGGT 62573 | | ||| | | ||||||| || |||| ||| ||||| | | | | | || Sbjct 88360 TCAAACCATTGGCCTTGATTTTCTCCTTTA-ATGAATCCCAGTCATATAAGTTGGTTGGC 88302 Query 62574 ACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 62633 | | | ||||| | ||| | || |||||| || | || Sbjct 88301 TTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGTC 88242 Query 62634 TCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATG 62693 ||||||||||| ||| || | || || | ||| ||||| || ||| | | ||||||| Sbjct 88241 TCATATGGTCCATCCCTCATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAATG 88182 Query 62694 GTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT-AA 62752 |||||||| || | |||| || || | |||||| || ||||||||| |||| | || Sbjct 88181 GTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCAA 88123 Query 62753 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62812 | || || || || || || ||||| ||||||| | | || ||||| | |||| |||| Sbjct 88122 CATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATATT 88063 Query 62813 AGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62869 || || ||| ||| || |||||| || || |||| || |||||||| | || Sbjct 88062 TGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGTT 88006 Query 62870 TCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGCC 62919 | | | || ||||| | ||| |||| |||| | || || || Sbjct 88005 TTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTTG 87948 Query 62920 -CATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCA 62975 |||| || ||| | ||| |||||||||| || | |||||| || ||| || Sbjct 87947 TCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCC 87888 Query 62976 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 63035 | || | ||||| | || ||| ||| | ||| | | |||||| || ||| Sbjct 87887 TCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAA 87828 Query 63036 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63095 |||||||||||| || |||||||| ||||||||||| | ||||| || ||||||||| Sbjct 87827 TTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTT 87768 Query 63096 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 63155 ||| | |||| ||||| |||| | ||| | | | || || ||| | || | Sbjct 87767 TCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCT 87708 Query 63156 CTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 63215 || | ||||||||| ||| ||||| ||| || ||| || || || | |||| | Sbjct 87707 CTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTC 87648 Query 63216 AATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63275 || | ||| |||| || | | || | ||| ||| | | | || |||| || | Sbjct 87647 AAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCC 87588 Query 63276 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTT 63335 ||||| | |||||||||||| | ||| |||| |||||||| |||| ||| || || Sbjct 87587 ATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTA 87528 Query 63336 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63395 || || || | | ||| | || | | |||||| |||||||| || || | ||| Sbjct 87527 CCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATAT 87468 Query 63396 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63455 | || | | ||||| | ||| || || || || || | || || || ||||||||| Sbjct 87467 AGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTA 87408 Query 63456 TAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCT 63515 | || || | |||||||||||| || || ||| ||||||| ||||||| ||||| Sbjct 87407 AAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAA 87348 Query 63516 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63575 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 87347 CCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAA 87288 Query 63576 GCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGA 63635 || ||| ||| || || |||||||| ||||| ||| ||| || |||| || || Sbjct 87287 GCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAG 87228 Query 63636 AAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63695 ||||| ||||||||| | | | ||| |||| ||| || | || |||||||| || Sbjct 87227 AAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGT 87168 Query 63696 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 63755 || || | | | || | | ||| || || |||||| | || || ||||| | Sbjct 87167 GTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACCA 87108 Query 63756 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815 ||||| || || || || | ||||| | || || || |||||| |||| || ||| Sbjct 87107 TGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCAGCAATCTTACCATTT 87048 Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63875 ||| | || | || |||| || ||||| |||||||||||||| || |||||| Sbjct 87047 ATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTCT 86988 Query 63876 CGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTA 63935 | || ||| ||| | || | ||| | || ||| | || || ||| || Sbjct 86987 CTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGTC 86928 Query 63936 ATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 63995 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 86927 TCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGA 86868 Query 63996 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTG 64055 | | |||||| ||| || |||||| ||| |||| ||||| || || | ||| Sbjct 86867 TTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTA 86808 Query 64056 GCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGCT 64112 || || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 86807 GCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGCA 86751 Query 64113 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATA 64172 || | | | || ||||| || ||||| || |||| ||| | || ||||| |||| | Sbjct 86750 GCTAAATTATCTAATTCGACAGTTGTAACACCATCATAAACACCAGAAATAATCTTCTGA 86691 Query 64173 GCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTT-TCTAAT 64228 | ||| | ||||| | || | || ||| ||||| |||||| |||||| Sbjct 86690 GTAATTGCAGAAGGATGCACGTGTCTTGAGTCTAAACCATATGCCAATTTCTCTAAT 86634 >seq10 Length=365393 Score = 302 bits (334), Expect = 6e-77 Identities = 601/884 (68%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 99463 TTTTGGTAGTCTGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 99522 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 ||||| || || || ||||| ||||| | ||| | |||| | | || ||| || | Sbjct 99523 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 99582 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | ||||||||| || || || | ||| ||||| || |||||| || | | Sbjct 99583 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 99642 Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 || || || || || |||| ||| | |||| |||||| || || | || || || Sbjct 99643 TTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTCGGTAATGAT 99701 Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 99702 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 99761 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649 |||| || | ||| || ||||||| ||| | ||||| || ||||| | || ||||| Sbjct 99762 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 99821 Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709 | || | |||||| | ||| || ||||| || ||||| || || ||||| || ||||| Sbjct 99822 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 99881 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACTT 33766 || |||||||| || | | |||||| || | || | || | ||||| || Sbjct 99882 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTT 99941 Query 33767 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33826 | |||||| |||||||| | || | ||| || || ||||| || ||||| || | | Sbjct 99942 TAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 100001 Query 33827 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33886 | |||| || |||||| | |||||||| ||||| | | ||| |||||||||| Sbjct 100002 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 100061 Query 33887 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT- 33945 ||||||||| || || || || || ||||||||| ||||||| | ||| || || | Sbjct 100062 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 100121 Query 33946 -CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAAC 34004 || | ||| || || ||||||||||||| ||||| |||||| || ||||| ||| Sbjct 100122 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 100179 Query 34005 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 34061 || | || | || || || |||| | | | | | || |||||||||| Sbjct 100180 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 100239 Query 34062 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 34121 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || ||| Sbjct 100240 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 100299 Query 34122 ATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 || | ||| || || ||||| | |||||| || | |||||| || Sbjct 100300 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815553092800