Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq24 489 2e-133 seq10 322 7e-83 >seq24 Length=140564 Score = 489 bits (542), Expect = 2e-133 Identities = 1401/2139 (65%), Gaps = 39/2139 (2%) Strand=Plus/Minus Query 78711 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 78770 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 88839 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 88780 Query 78771 TTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 78830 || || || |||| || ||||||||||| ||||| ||| | |||| Sbjct 88779 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 88720 Query 78831 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 78890 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 88719 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 88660 Query 78891 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 78949 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 88659 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 88601 Query 78950 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 79006 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 88600 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 88541 Query 79007 CTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 79066 |||||||| | | | || ||| |||| | | || || || || | || | Sbjct 88540 AATCATTCCAGAGTCCCATTTCAACCAAATCTCTCAACATATAAGGGTTGACAATCTGGA 88481 Query 79067 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCAT 79126 |||| || | || ||||| | || ||||||||| || || ||||| | |||| | Sbjct 88480 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 88421 Query 79127 TATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTC 79186 | | || | |||||||| ||||| || || ||||| ||||| || | || ||||| Sbjct 88420 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 88361 Query 79187 TAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGG-- 79244 | | ||| | | ||||||| || |||| || ||||| || | || || || Sbjct 88360 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTC----ATATAAGTTGGTT 88305 Query 79245 GACAACATTCC--AAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 | | | | || |||||||| | ||||| | ||| | || |||||| | Sbjct 88304 GGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAA 88245 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 || ||||| ||||| ||| | || ||||||| ||| ||||| || || | | |||| Sbjct 88244 GTCTCATATGGTCCATCCCTCATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAA 88185 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 |||||||| ||||| | |||| || || | ||||||| | ||||||||| |||| | Sbjct 88184 ATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCT 88126 Query 79423 -AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 79481 || | || || || ||||| || ||||| ||||||| | | || ||||| | |||| | Sbjct 88125 CAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCAT 88066 Query 79482 ATTAGAAATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 79538 ||| || || ||| ||| || |||||| || || |||| || |||||||| | Sbjct 88065 ATTTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAA 88009 Query 79539 ATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC------- 79591 || | | || || | || | || || ||| | | | | | Sbjct 88008 GTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTT 87949 Query 79592 --CATCTATTACAA-ACATGTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTC 79646 |||| || ||| | ||| ||| || ||| || | ||||||||| ||| || Sbjct 87948 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 87889 Query 79647 ATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAA 79706 | || | ||||| | |||||| ||| | || | | || || || || Sbjct 87888 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 87829 Query 79707 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGT 79766 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 87828 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 87769 Query 79767 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTA 79826 |||| | |||| ||||| |||| | ||| | | | || || ||| | | || Sbjct 87768 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 87709 Query 79827 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTC 79886 ||| ||||||||| |||| ||||||||| || ||| || || || | ||||| Sbjct 87708 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 87649 Query 79887 TAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTT 79946 || ||||| ||| ||| | | || | ||| ||| ||| | || |||| || Sbjct 87648 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 87589 Query 79947 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 80006 |||||| | |||||||||||| | ||| |||| |||||| | |||| || || || Sbjct 87588 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 87529 Query 80007 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 80066 || || || | | ||| | || | | |||||| |||||||| || || | || Sbjct 87528 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 87469 Query 80067 TATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 80126 || || | | || |||| ||| || || || || || | || || || |||||||| Sbjct 87468 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 87409 Query 80127 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 80186 | | || || | |||||||||||| ||||||||||||||||| || |||| ||||| Sbjct 87408 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 87349 Query 80187 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 87348 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 87289 Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306 || ||| ||| || ||||||||||| || || ||| ||| || |||| || || Sbjct 87288 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 87229 Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 87228 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 87169 Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 80426 || || | | | |||| | ||| || || |||||| | || || ||||| Sbjct 87168 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 87109 Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATT 80486 |||||| || || || || | ||||| | || || || |||||| | ||||| ||| Sbjct 87108 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCAGCAATCTTACCATT 87049 Query 80487 TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 80546 |||| | || | ||| |||| || ||||| |||||||||||||| || ||||| Sbjct 87048 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 86989 Query 80547 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 80606 || || ||| ||| | | | | ||| | || ||| | || | ||| || Sbjct 86988 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 86929 Query 80607 GATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 80666 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 86928 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 86869 Query 80667 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 80726 | | |||||| ||| || |||||| ||| |||| ||||| | || | ||| Sbjct 86868 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 86809 Query 80727 GGCGGCTAAAATGGCATAATCTGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 80783 || || || | |||||||||||||| | | ||| || || || || |||| || Sbjct 86808 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 86752 Query 80784 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822 || | | | || ||||| || ||||| || |||| ||| Sbjct 86751 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 86713 >seq10 Length=365393 Score = 322 bits (356), Expect = 7e-83 Identities = 610/888 (69%), Gaps = 20/888 (2%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 99463 TTTTGGTAGTCTGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 99522 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||| || || || ||||| ||||| | || | |||| | | || ||| || | Sbjct 99523 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 99582 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | |||||| || ||||| || | ||| ||||| || |||||| || | | Sbjct 99583 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 99642 Query 49849 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 || || || || || |||| ||| | |||| |||||| || || || || || || Sbjct 99643 TTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTCGGTAATGAT 99701 Query 49908 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 49967 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 99702 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 99761 Query 49968 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 50027 |||| || | ||| || ||||||| ||| || |||||||| ||||| | || ||||| Sbjct 99762 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 99821 Query 50028 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTC 50087 | || | |||||| | ||| || ||||| |||||||| ||||| ||||| || ||||| Sbjct 99822 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 99881 Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTGGCGCTGTCATGT---ATCCACT 50143 || || ||||| || || | |||||| || | | || || | || | ||||| | Sbjct 99882 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTT-ATCTGCAATCCATT 99940 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 || |||||| |||||||| | || | ||| || || ||||| || ||||| || | Sbjct 99941 TTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 100000 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | | |||| || |||||| | |||||||| ||||| | | ||| ||||||||| Sbjct 100001 ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAAT 100060 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 |||||||||| || || || || || ||||||||| ||||||| | ||| || || | Sbjct 100061 GAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACAT 100120 Query 50324 --CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381 || | ||| || ||| ||||||||||||| ||||| || ||| || ||||| || Sbjct 100121 CACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAA 100178 Query 50382 CGC--CAATACATGTTTTATAAAATGT----TTTTCGTTGGGTGTTAGTTTATTCCAATC 50435 ||| || | || | | ||| | |||||||| | | || |||||||| Sbjct 100179 CGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCT---ATTGTTCCAATC 100235 Query 50436 ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 50495 || | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || Sbjct 100236 ATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTT 100295 Query 50496 ATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 ||||| | ||| || || ||||| | |||||| || | |||||| || Sbjct 100296 GTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266465626400