Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq10 318 6e-82 >seq10 Length=365393 Score = 318 bits (352), Expect = 6e-82 Identities = 602/873 (69%), Gaps = 17/873 (2%) Strand=Plus/Plus Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655 ||||| ||||| || ||||| |||||||| | || || || || |||||||| || ||| Sbjct 99478 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 99537 Query 13656 GGATTTATT--GACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAA 13713 |||||| | | | || || |||| |||||||||| | | | |||| |||||| |||| Sbjct 99538 GGATTTGTAACGTCGTATAC-CTTT-TCACAACCTAATGCAATCAGTAGTCTATCTGCAA 99595 Query 13714 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13773 |||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| | Sbjct 99596 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 99655 Query 13774 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCT 13833 | || || || ||||| ||| || || || | || || | | | ||| | Sbjct 99656 CGTCAGTGAAGTATCTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 99715 Query 13834 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13893 | || | || || | |||| ||| | ||||| |||||||| ||| | | Sbjct 99716 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 99775 Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 | |||||||||| ||| || ||||| || || || || ||||||||||| |||| |||| Sbjct 99776 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 99835 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | ||||| || || | |||||||| || || ||||| || || ||||| |||||||| | Sbjct 99836 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 99895 Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073 | | || | ||| ||||| |||| | ||| | | ||||||||| ||||||||| | Sbjct 99896 CCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGG 99955 Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTC-CTTCTCTTTA 14132 |||| || ||| | ||||||||||| ||||| ||||| |||| ||| |||| Sbjct 99956 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 100015 Query 14133 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATA 14192 | ||| ||||| |||||||| | ||| ||| |||| || || ||||||||||| Sbjct 100016 GATCTT-TGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 100074 Query 14193 GCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC-CGAGTAAAATCT 14251 || || || ||||| || ||| |||| || | ||| || || | | |||| | Sbjct 100075 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAAT-T 100133 Query 14252 TTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTT 14311 || | ||||||||||| |||||||||||| ||| ||||| || || | | || Sbjct 100134 CTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGA 100193 Query 14312 AATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAATCGGATAAATCCTTAGA 14365 ||| ||| || || |||||| ||| | | || |||||||| ||||| || || Sbjct 100194 AATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGA 100250 Query 14366 AAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425 ||||| | ||| || | ||||| ||| || | || || || |||||| ||| || Sbjct 100251 GAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAAT 100310 Query 14426 TTCTTTATATAATATAGGAAAAACTACAAATCT 14458 ||| | ||| || ||||| | ||||| || Sbjct 100311 TTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479726440884000